RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ARMC9Q7Z3E5 817 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 CD302Q8IX05 232 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 WHAMMQ8TF30 809 aa23.35■■□□□ 1.33
TPM4-201ENST00000300933 UBLCP1Q8WVY7 318 aaPredicted RBP23.35■■□□□ 1.33
TPM4-201ENST00000300933 N4BP2L2Q92802 583 aaPredicted RBP23.35■■□□□ 1.33
TPM4-201ENST00000300933 GOLGA6L10A0A0M3HER8 536 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 MIF4GDA9UHW6 222 aaKnown RBP23.34■■□□□ 1.33
TPM4-201ENST00000300933 SNX1Q13596 522 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 MREGQ8N565 214 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 SCLT1Q96NL6 688 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 RPS6KC1Q96S38 1066 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 FAM118BQ9BPY3 351 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 DDX20Q9UHI6 824 aaKnown RBP23.34■■□□□ 1.33
TPM4-201ENST00000300933 C6orf89Q6UWU4 347 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 TMBIM4Q9HC24 238 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 USTQ9Y2C2 406 aa23.34■■□□□ 1.33
TPM4-201ENST00000300933 DNM1LO00429 736 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 MYZAPP0CAP1 466 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 ORC1Q13415 861 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 SEL1L2Q5TEA6 688 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 ZBTB8OSQ8IWT0 167 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 C1orf54Q8WWF1 131 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 FAM167AQ96KS9 214 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 HERPUD2Q9BSE4 406 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 WNT8AQ9H1J5 351 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 HAUS2Q9NVX0 235 aa23.33■■□□□ 1.33
TPM4-201ENST00000300933 LGR5O75473 907 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 MTA2O94776 668 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 RARAP10276 462 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 SSR1P43307 286 aaKnown RBP23.33■■□□□ 1.32
TPM4-201ENST00000300933 PLTPP55058 493 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 CUL1Q13616 776 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 ZNF568Q3ZCX4 644 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 JAMLQ86YT9 394 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 BRSK2Q8IWQ3 736 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.32
TPM4-201ENST00000300933 OSBPL7Q9BZF2 842 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 MAF1Q9H063 256 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 UVRAGQ9P2Y5 699 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 MCM8Q9UJA3 840 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 PCDHA3Q9Y5H8 950 aa23.33■■□□□ 1.32
TPM4-201ENST00000300933 GMNCA6NCL1 334 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ADORA2AP29274 412 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 CTNNA1P35221 906 aaKnown RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 EFNA5P52803 228 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 SNAPC2Q13487 334 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 EMC10Q5UCC4 262 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ZPBP2Q6X784 338 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ADAM22Q9P0K1 906 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 NXF1Q9UBU9 619 aaKnown RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 DIS3Q9Y2L1 958 aaKnown RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 ABLIM1O14639 778 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 KRT19P08727 400 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 INSRRP14616 1297 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 BRD2P25440 801 aaKnown RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 ELF1P32519 619 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ABCD1P33897 745 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ADCYAP1R1P41586 468 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 DHX9Q08211 1270 aaKnown RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 SF3A3Q12874 501 aaKnown RBP eCLIP23.32■■□□□ 1.321e-6■■■■■ 41.8
TPM4-201ENST00000300933 MXD4Q14582 209 aaPredicted RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 TTLL4Q14679 1199 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 E2F5Q15329 346 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ATG4AQ8WYN0 398 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 NAP1L3Q99457 506 aaPredicted RBP23.32■■□□□ 1.32
TPM4-201ENST00000300933 HEMGNQ9BXL5 484 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 ATP8A1Q9Y2Q0 1164 aa23.32■■□□□ 1.32
TPM4-201ENST00000300933 PDHXO00330 501 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 VTNP04004 478 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 CXCL8P10145 99 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 HSPA9P38646 679 aaKnown RBP23.31■■□□□ 1.32
TPM4-201ENST00000300933 TCEAL1Q15170 157 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 PREPLQ4J6C6 727 aaPredicted RBP23.31■■□□□ 1.32
TPM4-201ENST00000300933 CCDC137Q6PK04 289 aaKnown RBP23.31■■□□□ 1.32
TPM4-201ENST00000300933 PLPPR4Q7Z2D5 763 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 SLC13A5Q86YT5 568 aaPredicted RBP23.31■■□□□ 1.32
TPM4-201ENST00000300933 AFG1LQ8WV93 481 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 MROH8Q9H579 483 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 KLHL11Q9NVR0 708 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 IGKV6-21A0A0C4DH24 114 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 OGTO15294 1046 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 RAP1GAPP47736 663 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 RWDD2BP57060 319 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 UBAP2Q5T6F2 1119 aaKnown RBP23.31■■□□□ 1.32
TPM4-201ENST00000300933 ATF7IP2Q5U623 682 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 CYB5D1Q6P9G0 228 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 ABRAQ8N0Z2 381 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 ZNF606Q8WXB4 792 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 CPB2Q96IY4 423 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 ERP44Q9BS26 406 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 SMARCAD1Q9H4L7 1026 aa23.31■■□□□ 1.32
TPM4-201ENST00000300933 KIAA0391O15091 583 aaKnown RBP23.3■■□□□ 1.32
TPM4-201ENST00000300933 CYP1A1P04798 512 aaPredicted RBP23.3■■□□□ 1.32
TPM4-201ENST00000300933 SNCBQ16143 134 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 CDCA2Q69YH5 1023 aaPredicted RBP23.3■■□□□ 1.32
TPM4-201ENST00000300933 MON1BQ7L1V2 547 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 PARP9Q8IXQ6 854 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 CCDC105Q8IYK2 499 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms