RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 NMUR2Q9GZQ4 415 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 ZNF180Q9UJW8 692 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 A0A0J9YVX5 310 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 CLPTM1O96005 669 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 HPCAP84074 193 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 SYCP2LQ5T4T6 812 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 SLC17A7Q9P2U7 560 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 APEX2Q9UBZ4 518 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 DOLKQ9UPQ8 538 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 NUMBLQ9Y6R0 609 aa12.03□□□□□ -0.48
PTPRR-201ENST00000283228 BAZ2AQ9UIF9 1905 aaKnown RBP12.03□□□□□ -0.48
PTPRR-201ENST00000283228 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 I3L4J1 428 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 CALCAP01258 141 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 GYS1P13807 737 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 ANXA13P27216 316 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 ARL4CP56559 192 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 GPS1Q13098 491 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.48
PTPRR-201ENST00000283228 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.48
PTPRR-201ENST00000283228 FBXO27Q8NI29 283 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 ERMNQ8TAM6 284 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 KAT5Q92993 513 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.48
PTPRR-201ENST00000283228 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.48
PTPRR-201ENST00000283228 RANBP17Q9H2T7 1088 aaKnown RBP12.02□□□□□ -0.48
PTPRR-201ENST00000283228 PFDN4Q9NQP4 134 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 IL1RAPL1Q9NZN1 696 aa12.02□□□□□ -0.48
PTPRR-201ENST00000283228 ZMYM2Q9UBW7 1377 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 MYOCOSA0A1B0GUC4 107 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 SGPL1O95470 568 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 PENKP01210 267 aaPredicted RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 MT-ND3P03897 115 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 RALAP11233 206 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 CD58P19256 250 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 KLRK1P26718 216 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 JAM2P57087 298 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 IGBP1P78318 339 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 MTA1Q13330 715 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 NCOA4Q13772 614 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 SLC30A10Q6XR72 485 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ZNF554Q86TJ5 538 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ICA1LQ8NDH6 482 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 RBM15BQ8NDT2 890 aaKnown RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 CNBD2Q96M20 576 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 LRP6O75581 1613 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ATXN3P54252 364 aaPredicted RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 AQP4P55087 323 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 DLG1Q12959 904 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 EFTUD2Q15029 972 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 PDK3Q15120 406 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 CYTH1Q15438 398 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 B3GNT6Q6ZMB0 384 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ARID3BQ8IVW6 561 aaPredicted RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 POU5F2Q8N7G0 328 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 GDPD5Q8WTR4 605 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 RPL26L1Q9UNX3 145 aaKnown RBP12.02□□□□□ -0.49
PTPRR-201ENST00000283228 ZNF510Q9Y2H8 683 aa12.02□□□□□ -0.49
PTPRR-201ENST00000283228 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
PTPRR-201ENST00000283228 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
PTPRR-201ENST00000283228 PDXKO00764 312 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 LPXNO60711 386 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 FGFR1P11362 822 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 CCDC92Q53HC0 331 aaPredicted RBP12.01□□□□□ -0.49
PTPRR-201ENST00000283228 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 PACSIN3Q9UKS6 424 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 ZNF862O60290 1169 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 ETS1P14921 441 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 RGS2P41220 211 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
PTPRR-201ENST00000283228 TMPRSS15P98073 1019 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 CDK16Q00536 496 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 BBS9Q3SYG4 887 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 TPH2Q8IWU9 490 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 PALM2Q8IXS6 379 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 STKLD1Q8NE28 680 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 OXNAD1Q96HP4 312 aaPredicted RBP12.01□□□□□ -0.49
PTPRR-201ENST00000283228 PSTPIP2Q9H939 334 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 PCDHA3Q9Y5H8 950 aa12.01□□□□□ -0.49
PTPRR-201ENST00000283228 BMP3P12645 472 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms