RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 KIF22Q14807 665 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 TDRD10Q5VZ19 366 aaKnown RBP13.28□□□□□ -0.28
UBXN4-201ENST00000272638 CATSPER4Q7RTX7 472 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 CCNYQ8ND76 341 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 PITPNM3Q9BZ71 974 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 TXNDC16Q9P2K2 825 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 POLIQ9UNA4 740 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 O00370 1275 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 ITGB3P05106 788 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 GZMAP12544 262 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 ALDH3A1P30838 453 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 HIRAP54198 1017 aaPredicted RBP13.28□□□□□ -0.28
UBXN4-201ENST00000272638 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
UBXN4-201ENST00000272638 FAM71AQ8IYT1 594 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
UBXN4-201ENST00000272638 TGS1Q96RS0 853 aaKnown RBP13.28□□□□□ -0.28
UBXN4-201ENST00000272638 ZNF536O15090 1300 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 C19orf81C9J6K1 198 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 PRPSAP2O60256 369 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 CFHP08603 1231 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 P4HA1P13674 534 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 GLRA2P23416 452 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 ADORA2BP29275 332 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 GBP1P32455 592 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 NAA25Q14CX7 972 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 POTEAQ6S8J7 498 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 ENOSF1Q7L5Y1 443 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 CROCCP2Q86T23 111 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 FEZF2Q8TBJ5 459 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 TTC17Q96AE7 1141 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 SENP7Q9BQF6 1050 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 GPATCH2LQ9NWQ4 482 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.28
UBXN4-201ENST00000272638 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 TBXAS1P24557 533 aaPredicted RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 YWHAEP62258 255 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 GPR162Q16538 588 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 LRIG3Q6UXM1 1119 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 SHC3Q92529 594 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 FAM81BQ96LP2 452 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 IP6K2Q9UHH9 426 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 R3HDM2Q9Y2K5 976 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 NUB1Q9Y5A7 615 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 DDX3YO15523 660 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 IL9RQ01113 521 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 ATF7IP2Q5U623 682 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 DCAF12L1Q5VU92 463 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 MED10Q9BTT4 135 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
UBXN4-201ENST00000272638 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
UBXN4-201ENST00000272638 INHBAP08476 426 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
UBXN4-201ENST00000272638 MSH2P43246 934 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 NUMBP49757 651 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 MFSD7Q6UXD7 560 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 PACS2Q86VP3 889 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CFAP57Q96MR6 1250 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 ADGRA3Q8IWK6 1321 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 MAN1A1P33908 653 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CHKAP35790 457 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CENPUQ71F23 418 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 RUBCNQ92622 972 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 METTL5Q9NRN9 209 aaKnown RBP13.26□□□□□ -0.29
UBXN4-201ENST00000272638 DMAC2Q9NW81 257 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 A0A0G2JND7 137 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 B4GALT5O43286 388 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 BANF1O75531 89 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
UBXN4-201ENST00000272638 CALB1P05937 261 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 RPS6KC1Q96S38 1066 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 TIPINQ9BVW5 301 aa13.26□□□□□ -0.29
UBXN4-201ENST00000272638 E2F8A0AVK6 867 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 H0Y3Z8 333 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 IRF6O14896 467 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 CYP2C8P10632 490 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
UBXN4-201ENST00000272638 MMP14P50281 582 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 TAS2R40P59535 323 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 ARHGEF18Q6ZSZ5 1173 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 PDIK1LQ8N165 341 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 FAM71DQ8N9W8 422 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 UBXN6Q9BZV1 441 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 CHMP2BQ9UQN3 213 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 MYH1P12882 1939 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 CAPN9O14815 690 aa13.25□□□□□ -0.29
UBXN4-201ENST00000272638 MAFGO15525 162 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms