RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CLCN3P51790 818 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 PMS1P54277 932 aaKnown RBP14.71□□□□□ -0.05
CDH3-201ENST00000264012 ZNF235Q14590 738 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 SV2CQ496J9 727 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 LRIG3Q6UXM1 1119 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 ACAD11Q709F0 780 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 FRA10AC1Q70Z53 315 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 CDC26Q8NHZ8 85 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
CDH3-201ENST00000264012 ALKBH8Q96BT7 664 aaKnown RBP14.71□□□□□ -0.05
CDH3-201ENST00000264012 AGAP3Q96P47 875 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 TJP2Q9UDY2 1190 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 GARTP22102 1010 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 IL1RL1Q01638 556 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 CDR2Q01850 454 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 KIF19Q2TAC6 998 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 RASIP1Q5U651 963 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 FGD4Q96M96 766 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 ADAM33Q9BZ11 813 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 OLFML3Q9NRN5 406 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 EHD2Q9NZN4 543 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 SUN2Q9UH99 717 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 SNX2O60749 519 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 SGPL1O95470 568 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 SMTNL2Q2TAL5 461 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 RSAD1Q9HA92 442 aa14.71□□□□□ -0.05
CDH3-201ENST00000264012 CFAP69A5D8W1 941 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 GSTA4O15217 222 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 TADA2AO75478 443 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.06
CDH3-201ENST00000264012 HIPK4Q8NE63 616 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 OR2W6PQ8NHA6 318 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 SPATA18Q8TC71 538 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 LACRTQ9GZZ8 138 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 CAPN6Q9Y6Q1 641 aa14.71□□□□□ -0.06
CDH3-201ENST00000264012 RBP3P10745 1247 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 HSPA8P11142 646 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 PCSK1P29120 753 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 ACADSBP45954 432 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 LONRF1Q17RB8 773 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 CYP4A22Q5TCH4 519 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 SLC30A10Q6XR72 485 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 PNMA5Q96PV4 448 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 GPD1P21695 349 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 MDH1P40925 334 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 DEUP1Q05D60 604 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 GOLGA7BQ2TAP0 167 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 ISCUQ9H1K1 167 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 MROH8Q9H579 483 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 SARS2Q9NP81 518 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 KCNQ5Q9NR82 932 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 ZC3H7BQ9UGR2 993 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 FAM86B1E9PN63 330 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 GOLGA8RI6L899 631 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 WNT10BO00744 389 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 KIF3CO14782 793 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 DIAPH2O60879 1101 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 FAM86B2P0C5J1 330 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 GTF2A2P52657 109 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 TAF11Q15544 211 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 ATXN7L3BQ96GX2 97 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 SKIP12755 728 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 GNL1P36915 607 aaPredicted RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 CPT1AP50416 773 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 E2F4Q16254 413 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 NT5DC1Q5TFE4 455 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 FBXO16Q8IX29 292 aaPredicted RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
CDH3-201ENST00000264012 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 METTL5Q9NRN9 209 aaKnown RBP14.7□□□□□ -0.06
CDH3-201ENST00000264012 A0A087X0B3 334 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 C3orf70A6NLC5 250 aaPredicted RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 MAP3K7O43318 606 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 SLC13A5Q86YT5 568 aaPredicted RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 GANCQ8TET4 914 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 ZSWIM1Q9BR11 485 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 PACSIN1Q9BY11 444 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 FOXP3Q9BZS1 431 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 PSD3Q9NYI0 1048 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 XPO7Q9UIA9 1087 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 ZNF484Q5JVG2 852 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 BTBD6Q96KE9 485 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 ALG13Q9NP73 1137 aaKnown RBP14.69□□□□□ -0.06
CDH3-201ENST00000264012 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 SMIM22K7EJ46 135 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 NNMTP40261 264 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 CENPCQ03188 943 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 KYNUQ16719 465 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 C9orf131Q5VYM1 1079 aa14.69□□□□□ -0.06
CDH3-201ENST00000264012 KDELC2Q7Z4H8 507 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms