RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
SEH1L-208ENST00000590843 LRRC59Q96AG4 307 aaKnown RBP14.52□□□□□ -0.08
SEH1L-208ENST00000590843 ANKRD30BQ9BXX2 1392 aa14.52□□□□□ -0.09
SEH1L-208ENST00000590843 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
SEH1L-208ENST00000590843 NPHP3Q7Z494 1330 aa14.5□□□□□ -0.09
SEH1L-208ENST00000590843 LRRFIP1Q32MZ4 808 aaKnown RBP14.5□□□□□ -0.09
SEH1L-208ENST00000590843 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
SEH1L-208ENST00000590843 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
SEH1L-208ENST00000590843 KIF14Q15058 1648 aa14.5□□□□□ -0.09
SEH1L-208ENST00000590843 HSPA2P54652 639 aa14.49□□□□□ -0.09
SEH1L-208ENST00000590843 RALBP1Q15311 655 aa14.49□□□□□ -0.09
SEH1L-208ENST00000590843 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
SEH1L-208ENST00000590843 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
SEH1L-208ENST00000590843 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
SEH1L-208ENST00000590843 CCDC141Q6ZP82 1450 aa14.48□□□□□ -0.09
SEH1L-208ENST00000590843 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
SEH1L-208ENST00000590843 BAG6P46379 1132 aa14.47□□□□□ -0.09
SEH1L-208ENST00000590843 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
SEH1L-208ENST00000590843 RTEL1-TNFRSF6BF6WH68 1400 aa14.46□□□□□ -0.09
SEH1L-208ENST00000590843 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.1
SEH1L-208ENST00000590843 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 EXOC5O00471 708 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 HMMRO75330 724 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 ZNF772Q68DY9 489 aaPredicted RBP14.45□□□□□ -0.1
SEH1L-208ENST00000590843 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 PHF8Q9UPP1 1060 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 C8orf37Q96NL8 207 aa14.45□□□□□ -0.1
SEH1L-208ENST00000590843 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
SEH1L-208ENST00000590843 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
SEH1L-208ENST00000590843 DAPK1P53355 1430 aa14.44□□□□□ -0.1
SEH1L-208ENST00000590843 ZRSR1Q15695 479 aaKnown RBP14.44□□□□□ -0.1
SEH1L-208ENST00000590843 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
SEH1L-208ENST00000590843 PRAM1Q96QH2 718 aa14.43□□□□□ -0.1
SEH1L-208ENST00000590843 UHRF1BP1LA0JNW5 1464 aa14.43□□□□□ -0.1
SEH1L-208ENST00000590843 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
SEH1L-208ENST00000590843 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
SEH1L-208ENST00000590843 CABP4P57796 275 aa14.42□□□□□ -0.1
SEH1L-208ENST00000590843 ZNF652Q9Y2D9 606 aa14.42□□□□□ -0.1
SEH1L-208ENST00000590843 DIAPH1O60610 1272 aaKnown RBP14.42□□□□□ -0.1
SEH1L-208ENST00000590843 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
SEH1L-208ENST00000590843 ABCC2Q92887 1545 aa14.42□□□□□ -0.1
SEH1L-208ENST00000590843 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
SEH1L-208ENST00000590843 PAXIP1Q6ZW49 1069 aaPredicted RBP14.41□□□□□ -0.1
SEH1L-208ENST00000590843 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
SEH1L-208ENST00000590843 RAB3GAP2Q9H2M9 1393 aa14.41□□□□□ -0.1
SEH1L-208ENST00000590843 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
SEH1L-208ENST00000590843 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.1
SEH1L-208ENST00000590843 DHX29Q7Z478 1369 aaKnown RBP14.4□□□□□ -0.1
SEH1L-208ENST00000590843 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
SEH1L-208ENST00000590843 PNISRQ8TF01 805 aaKnown RBP14.39□□□□□ -0.11
SEH1L-208ENST00000590843 FRAT1Q92837 279 aaPredicted RBP14.39□□□□□ -0.11
SEH1L-208ENST00000590843 STK32BQ9NY57 414 aa14.39□□□□□ -0.11
SEH1L-208ENST00000590843 ZPR1O75312 459 aa14.39□□□□□ -0.11
SEH1L-208ENST00000590843 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
SEH1L-208ENST00000590843 CLSTN1O94985 981 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
SEH1L-208ENST00000590843 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 MCCP23508 829 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 AK7Q96M32 723 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
SEH1L-208ENST00000590843 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
SEH1L-208ENST00000590843 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
SEH1L-208ENST00000590843 CDCA7Q9BWT1 371 aaPredicted RBP14.37□□□□□ -0.11
SEH1L-208ENST00000590843 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
SEH1L-208ENST00000590843 PLCH2O75038 1416 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 KIAA1211Q6ZU35 1233 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 STARD3NLO95772 234 aa14.36□□□□□ -0.11
SEH1L-208ENST00000590843 TMEM132EQ6IEE7 984 aa14.35□□□□□ -0.11
SEH1L-208ENST00000590843 TCEAL9Q9UHQ7 104 aa14.35□□□□□ -0.11
SEH1L-208ENST00000590843 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
SEH1L-208ENST00000590843 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
SEH1L-208ENST00000590843 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
SEH1L-208ENST00000590843 HSPA5P11021 654 aaKnown RBP14.34□□□□□ -0.11
SEH1L-208ENST00000590843 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
SEH1L-208ENST00000590843 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
SEH1L-208ENST00000590843 PRXQ9BXM0 1461 aa14.33□□□□□ -0.11
SEH1L-208ENST00000590843 ZRANB1Q9UGI0 708 aa14.33□□□□□ -0.11
SEH1L-208ENST00000590843 ATP10AO60312 1499 aa14.33□□□□□ -0.11
SEH1L-208ENST00000590843 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
SEH1L-208ENST00000590843 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
SEH1L-208ENST00000590843 A0A087WZG4 1122 aa14.33□□□□□ -0.12
SEH1L-208ENST00000590843 ANP32EQ9BTT0 268 aa14.33□□□□□ -0.12
SEH1L-208ENST00000590843 TMOD2Q9NZR1 351 aa14.32□□□□□ -0.12
SEH1L-208ENST00000590843 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
SEH1L-208ENST00000590843 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
SEH1L-208ENST00000590843 FOXO3O43524 673 aa14.32□□□□□ -0.12
SEH1L-208ENST00000590843 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
SEH1L-208ENST00000590843 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
SEH1L-208ENST00000590843 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
SEH1L-208ENST00000590843 DISP3Q9P2K9 1392 aa14.31□□□□□ -0.12
SEH1L-208ENST00000590843 NEO1Q92859 1461 aa14.31□□□□□ -0.12
SEH1L-208ENST00000590843 XPCQ01831 940 aaPredicted RBP14.31□□□□□ -0.12
SEH1L-208ENST00000590843 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
SEH1L-208ENST00000590843 A2MP01023 1474 aa14.31□□□□□ -0.12
SEH1L-208ENST00000590843 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms