RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 RBM25P49756 843 aaKnown RBP5.37□□□□□ -1.55
CDH8-205ENST00000577730 BANK1Q8NDB2 785 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 CCDC91Q7Z6B0 441 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 NOL8Q76FK4 1167 aaKnown RBP5.37□□□□□ -1.55
CDH8-205ENST00000577730 PLCD4Q9BRC7 762 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 HMMRO75330 724 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 ERLIN1O75477 346 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 TMCO3Q6UWJ1 677 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 MYBBP1AQ9BQG0 1328 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 EIF3AQ14152 1382 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 MTUS2Q5JR59 1369 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 RAB3GAP2Q9H2M9 1393 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 PES1O00541 588 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 BCCIPQ9P287 314 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDH8-205ENST00000577730 ROCK2O75116 1388 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 NPHP1O15259 732 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 DHX37Q8IY37 1157 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 DYDC1Q8WWB3 177 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 DNAAF4Q8WXU2 420 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 WRNQ14191 1432 aaPredicted RBP eCLIP5.36□□□□□ -1.55
CDH8-205ENST00000577730 RSF1Q96T23 1441 aaPredicted RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 SARNPP82979 210 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 FAM184AQ8NB25 1140 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 DDX11Q96FC9 970 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 PRPF40AO75400 957 aaKnown RBP5.36□□□□□ -1.55
CDH8-205ENST00000577730 SLC26A8Q96RN1 970 aa5.36□□□□□ -1.55
CDH8-205ENST00000577730 TTLL5Q6EMB2 1281 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 FEZ1Q99689 392 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 MYCBPQ99417 103 aaPredicted RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 OGFRQ9NZT2 677 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 MNAT1P51948 309 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 GABPB1Q06547 395 aaPredicted RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 ZNF526Q8TF50 670 aaPredicted RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 TPM1P09493 284 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 NF2P35240 595 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 BMS1Q14692 1282 aaKnown RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 SMG6Q86US8 1419 aaKnown RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 DHX8Q14562 1220 aaKnown RBP5.35□□□□□ -1.55
CDH8-205ENST00000577730 TRIM5Q9C035 493 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 CEP164Q9UPV0 1460 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 VPS8Q8N3P4 1428 aa5.35□□□□□ -1.55
CDH8-205ENST00000577730 DMTNQ08495 405 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 KIF2AO00139 706 aaPredicted RBP5.34□□□□□ -1.55
CDH8-205ENST00000577730 HS1BP3Q53T59 392 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 GORABQ5T7V8 394 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 FILIP1Q7Z7B0 1213 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 OS9Q13438 667 aaPredicted RBP5.34□□□□□ -1.55
CDH8-205ENST00000577730 CCDC34Q96HJ3 373 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 INCENPQ9NQS7 918 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 KIF15Q9NS87 1388 aa5.34□□□□□ -1.55
CDH8-205ENST00000577730 TTC31Q49AM3 519 aaPredicted RBP5.34□□□□□ -1.56
CDH8-205ENST00000577730 CLUAP1Q96AJ1 413 aa5.34□□□□□ -1.56
CDH8-205ENST00000577730 A0A1B0GUL7 405 aa5.34□□□□□ -1.56
CDH8-205ENST00000577730 GOLGA6L7A0A1B0GV03 622 aa5.34□□□□□ -1.56
CDH8-205ENST00000577730 TOMM22Q9NS69 142 aa5.34□□□□□ -1.56
CDH8-205ENST00000577730 ZCCHC6Q5VYS8 1495 aaKnown RBP5.33□□□□□ -1.56
CDH8-205ENST00000577730 IVLP07476 585 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 FOXD4L6Q3SYB3 417 aaPredicted RBP5.33□□□□□ -1.56
CDH8-205ENST00000577730 FOXD4L3Q6VB84 417 aaPredicted RBP5.33□□□□□ -1.56
CDH8-205ENST00000577730 SHTN1A0MZ66 631 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 TMF1P82094 1093 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 PANK2Q9BZ23 570 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 UBXN4Q92575 508 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 COG6Q9Y2V7 657 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 REC8O95072 547 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 SRPK2P78362 688 aaKnown RBP5.33□□□□□ -1.56
CDH8-205ENST00000577730 RABEP1Q15276 862 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 MPNDQ8N594 471 aa5.33□□□□□ -1.56
CDH8-205ENST00000577730 CREBRFQ8IUR6 639 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 SPC24Q8NBT2 197 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 ZFP91Q96JP5 570 aaPredicted RBP5.32□□□□□ -1.56
CDH8-205ENST00000577730 ZKSCAN5Q9Y2L8 839 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 CENPHQ9H3R5 247 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 GOLIM4O00461 696 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 ZRSR2Q15696 482 aaKnown RBP5.32□□□□□ -1.56
CDH8-205ENST00000577730 TICAM2Q86XR7 235 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 APBB1O00213 710 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 CT47B1P0C2W7 299 aaPredicted RBP5.32□□□□□ -1.56
CDH8-205ENST00000577730 CCDC102AQ96A19 550 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 POLR3GO15318 223 aaPredicted RBP5.32□□□□□ -1.56
CDH8-205ENST00000577730 IGSF3O75054 1194 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 SKIDA1Q1XH10 827 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 AKNAQ7Z591 1439 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 CNTLNQ9NXG0 1405 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 LIG1P18858 919 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 KIAA1328Q86T90 577 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
CDH8-205ENST00000577730 CWC22Q9HCG8 908 aaKnown RBP5.31□□□□□ -1.56
CDH8-205ENST00000577730 MYO6Q9UM54 1294 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 TMCO5BA8MYB1 307 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 SETSIPP0DME0 302 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 BICD2Q8TD16 824 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 MRVI1Q9Y6F6 885 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 MEX3CQ5U5Q3 659 aaKnown RBP5.31□□□□□ -1.56
CDH8-205ENST00000577730 MPHOSPH10O00566 681 aaKnown RBP5.31□□□□□ -1.56
CDH8-205ENST00000577730 ANKRD20A12PQ8NF67 263 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 GOLGA6L10A6NI86 522 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 LMAN1P49257 510 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms