RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
SRRM2-230ENST00000576924 SLC24A1O60721 1099 aa21.7■■□□□ 1.06
SRRM2-230ENST00000576924 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
SRRM2-230ENST00000576924 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
SRRM2-230ENST00000576924 NUP160Q12769 1436 aa21.69■■□□□ 1.06
SRRM2-230ENST00000576924 LRPPRCP42704 1394 aaKnown RBP21.69■■□□□ 1.06
SRRM2-230ENST00000576924 MINK1Q8N4C8 1332 aaPredicted RBP21.69■■□□□ 1.06
SRRM2-230ENST00000576924 FTSJ3Q8IY81 847 aaKnown RBP21.69■■□□□ 1.06
SRRM2-230ENST00000576924 CENPJQ9HC77 1338 aaPredicted RBP21.69■■□□□ 1.06
SRRM2-230ENST00000576924 ELL2O00472 640 aaPredicted RBP21.69■■□□□ 1.06
SRRM2-230ENST00000576924 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 KDM5CP41229 1560 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 NUTM2FA1L443 756 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 FBLN1P23142 703 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.68■■□□□ 1.06
SRRM2-230ENST00000576924 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
SRRM2-230ENST00000576924 RNF123Q5XPI4 1314 aa21.66■■□□□ 1.06
SRRM2-230ENST00000576924 TCP11L2Q8N4U5 519 aa21.66■■□□□ 1.06
SRRM2-230ENST00000576924 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
SRRM2-230ENST00000576924 CARD14Q9BXL6 1004 aa21.66■■□□□ 1.06
SRRM2-230ENST00000576924 TSR2Q969E8 191 aaKnown RBP21.66■■□□□ 1.06
SRRM2-230ENST00000576924 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
SRRM2-230ENST00000576924 UHRF1BP1Q6BDS2 1440 aa21.65■■□□□ 1.06
SRRM2-230ENST00000576924 PLA2R1Q13018 1463 aa21.65■■□□□ 1.06
SRRM2-230ENST00000576924 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
SRRM2-230ENST00000576924 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
SRRM2-230ENST00000576924 IGHDP01880 384 aa21.61■■□□□ 1.05
SRRM2-230ENST00000576924 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
SRRM2-230ENST00000576924 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
SRRM2-230ENST00000576924 E9PSI1 815 aa21.59■■□□□ 1.05
SRRM2-230ENST00000576924 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.59■■□□□ 1.05
SRRM2-230ENST00000576924 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
SRRM2-230ENST00000576924 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
SRRM2-230ENST00000576924 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.05
SRRM2-230ENST00000576924 EIF5BO60841 1220 aaKnown RBP21.58■■□□□ 1.04
SRRM2-230ENST00000576924 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.04
SRRM2-230ENST00000576924 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
SRRM2-230ENST00000576924 UPF2Q9HAU5 1272 aaKnown RBP21.57■■□□□ 1.04
SRRM2-230ENST00000576924 MS4A1P11836 297 aa21.57■■□□□ 1.04
SRRM2-230ENST00000576924 CDC42BPAQ5VT25 1732 aa21.56■■□□□ 1.04
SRRM2-230ENST00000576924 WWC1Q8IX03 1113 aa21.56■■□□□ 1.04
SRRM2-230ENST00000576924 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
SRRM2-230ENST00000576924 NFKBIBQ15653 356 aa21.55■■□□□ 1.04
SRRM2-230ENST00000576924 GZF1Q9H116 711 aaPredicted RBP21.55■■□□□ 1.04
SRRM2-230ENST00000576924 FRAT2O75474 233 aaPredicted RBP21.55■■□□□ 1.04
SRRM2-230ENST00000576924 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
SRRM2-230ENST00000576924 APBB1O00213 710 aa21.54■■□□□ 1.04
SRRM2-230ENST00000576924 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
SRRM2-230ENST00000576924 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
SRRM2-230ENST00000576924 CYB5RLQ6IPT4 315 aa21.53■■□□□ 1.04
SRRM2-230ENST00000576924 ADGBQ8N7X0 1667 aa21.52■■□□□ 1.04
SRRM2-230ENST00000576924 ABCA8O94911 1581 aa21.52■■□□□ 1.04
SRRM2-230ENST00000576924 HMOX1P09601 288 aa21.52■■□□□ 1.04
SRRM2-230ENST00000576924 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.04
SRRM2-230ENST00000576924 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
SRRM2-230ENST00000576924 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
SRRM2-230ENST00000576924 SEC24BO95487 1268 aa21.5■■□□□ 1.03
SRRM2-230ENST00000576924 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
SRRM2-230ENST00000576924 NSD3Q9BZ95 1437 aa21.49■■□□□ 1.03
SRRM2-230ENST00000576924 TTC37Q6PGP7 1564 aa21.49■■□□□ 1.03
SRRM2-230ENST00000576924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.48■■□□□ 1.039e-17■□□□□ 9.3
SRRM2-230ENST00000576924 RUNDC1Q96C34 613 aa21.48■■□□□ 1.03
SRRM2-230ENST00000576924 PLCH2O75038 1416 aa21.48■■□□□ 1.03
SRRM2-230ENST00000576924 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
SRRM2-230ENST00000576924 CGNL1Q0VF96 1302 aa21.47■■□□□ 1.03
SRRM2-230ENST00000576924 RLBP1P12271 317 aa21.47■■□□□ 1.03
SRRM2-230ENST00000576924 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
SRRM2-230ENST00000576924 UGGT1Q9NYU2 1555 aa21.47■■□□□ 1.03
SRRM2-230ENST00000576924 NOS1P29475 1434 aa21.46■■□□□ 1.03
SRRM2-230ENST00000576924 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.03
SRRM2-230ENST00000576924 ESF1Q9H501 851 aaKnown RBP21.44■■□□□ 1.02
SRRM2-230ENST00000576924 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
SRRM2-230ENST00000576924 FBXO31Q5XUX0 539 aaPredicted RBP21.44■■□□□ 1.02
SRRM2-230ENST00000576924 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
SRRM2-230ENST00000576924 RIPK4P57078 832 aa21.44■■□□□ 1.02
SRRM2-230ENST00000576924 C1orf115Q9H7X2 142 aa21.43■■□□□ 1.02
SRRM2-230ENST00000576924 PDZRN3Q9UPQ7 1066 aa21.43■■□□□ 1.02
SRRM2-230ENST00000576924 SCAF11Q99590 1463 aaKnown RBP21.43■■□□□ 1.02
SRRM2-230ENST00000576924 C8orf34Q49A92 452 aa21.42■■□□□ 1.02
SRRM2-230ENST00000576924 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
SRRM2-230ENST00000576924 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
SRRM2-230ENST00000576924 FANCAO15360 1455 aa21.41■■□□□ 1.02
SRRM2-230ENST00000576924 BECN1Q14457 450 aa21.4■■□□□ 1.02
SRRM2-230ENST00000576924 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
SRRM2-230ENST00000576924 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
SRRM2-230ENST00000576924 IDI1Q13907 227 aa21.4■■□□□ 1.02
SRRM2-230ENST00000576924 ADGRL1O94910 1474 aa21.4■■□□□ 1.02
SRRM2-230ENST00000576924 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.02
SRRM2-230ENST00000576924 VGFO15240 615 aaPredicted RBP21.39■■□□□ 1.01
SRRM2-230ENST00000576924 WAPLQ7Z5K2 1190 aa21.39■■□□□ 1.01
SRRM2-230ENST00000576924 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.01
SRRM2-230ENST00000576924 GSE1Q14687 1217 aa21.39■■□□□ 1.01
SRRM2-230ENST00000576924 LNPKQ9C0E8 428 aa21.39■■□□□ 1.01
SRRM2-230ENST00000576924 CABP1Q9NZU7 370 aa21.39■■□□□ 1.01
SRRM2-230ENST00000576924 RWDD1Q9H446 243 aaPredicted RBP21.38■■□□□ 1.01
SRRM2-230ENST00000576924 TPRNQ4KMQ1 711 aa21.37■■□□□ 1.01
SRRM2-230ENST00000576924 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
SRRM2-230ENST00000576924 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms