RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
CNEP1R1-204ENST00000562576 LRP6O75581 1613 aa11.4□□□□□ -0.58
CNEP1R1-204ENST00000562576 KIAA1107Q9UPP5 1409 aa11.4□□□□□ -0.58
CNEP1R1-204ENST00000562576 SYNMO15061 1565 aa11.4□□□□□ -0.58
CNEP1R1-204ENST00000562576 ROBO1Q9Y6N7 1651 aa11.4□□□□□ -0.59
CNEP1R1-204ENST00000562576 TMEM94Q12767 1356 aa11.39□□□□□ -0.59
CNEP1R1-204ENST00000562576 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
CNEP1R1-204ENST00000562576 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
CNEP1R1-204ENST00000562576 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
CNEP1R1-204ENST00000562576 ADGBQ8N7X0 1667 aa11.37□□□□□ -0.59
CNEP1R1-204ENST00000562576 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
CNEP1R1-204ENST00000562576 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
CNEP1R1-204ENST00000562576 EEA1Q15075 1411 aa11.35□□□□□ -0.59
CNEP1R1-204ENST00000562576 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
CNEP1R1-204ENST00000562576 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
CNEP1R1-204ENST00000562576 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
CNEP1R1-204ENST00000562576 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CNEP1R1-204ENST00000562576 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
CNEP1R1-204ENST00000562576 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
CNEP1R1-204ENST00000562576 SCAF11Q99590 1463 aaKnown RBP11.33□□□□□ -0.6
CNEP1R1-204ENST00000562576 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.6
CNEP1R1-204ENST00000562576 JCADQ9P266 1359 aa11.33□□□□□ -0.6
CNEP1R1-204ENST00000562576 RXRBP28702 533 aa11.33□□□□□ -0.6
CNEP1R1-204ENST00000562576 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
CNEP1R1-204ENST00000562576 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
CNEP1R1-204ENST00000562576 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
CNEP1R1-204ENST00000562576 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
CNEP1R1-204ENST00000562576 CFAP65Q6ZU64 1925 aaKnown RBP11.31□□□□□ -0.6
CNEP1R1-204ENST00000562576 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
CNEP1R1-204ENST00000562576 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
CNEP1R1-204ENST00000562576 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
CNEP1R1-204ENST00000562576 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 KCNA6P17658 529 aa11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
CNEP1R1-204ENST00000562576 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
CNEP1R1-204ENST00000562576 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
CNEP1R1-204ENST00000562576 COL16A1Q07092 1604 aaPredicted RBP11.28□□□□□ -0.6
CNEP1R1-204ENST00000562576 ABCC3O15438 1527 aa11.28□□□□□ -0.6
CNEP1R1-204ENST00000562576 SLIT1O75093 1534 aa11.26□□□□□ -0.61
CNEP1R1-204ENST00000562576 AFF2P51816 1311 aa11.26□□□□□ -0.61
CNEP1R1-204ENST00000562576 RGS12O14924 1447 aa11.26□□□□□ -0.61
CNEP1R1-204ENST00000562576 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
CNEP1R1-204ENST00000562576 NUTM2DQ5VT03 806 aaPredicted RBP11.25□□□□□ -0.61
CNEP1R1-204ENST00000562576 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 EID1Q9Y6B2 187 aa11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 SPATA31A6Q5VVP1 1343 aa11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 TET3O43151 1660 aa11.24□□□□□ -0.61
CNEP1R1-204ENST00000562576 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
CNEP1R1-204ENST00000562576 MIER1Q8N108 512 aa11.23□□□□□ -0.61
CNEP1R1-204ENST00000562576 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
CNEP1R1-204ENST00000562576 PRDM15P57071 1507 aaPredicted RBP11.23□□□□□ -0.61
CNEP1R1-204ENST00000562576 MSH6P52701 1360 aa11.22□□□□□ -0.61
CNEP1R1-204ENST00000562576 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
CNEP1R1-204ENST00000562576 FYCO1Q9BQS8 1478 aa11.22□□□□□ -0.61
CNEP1R1-204ENST00000562576 CEP152O94986 1710 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 C7P10643 843 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 IDI1Q13907 227 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
CNEP1R1-204ENST00000562576 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 CCDC141Q6ZP82 1450 aa11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
CNEP1R1-204ENST00000562576 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
CNEP1R1-204ENST00000562576 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
CNEP1R1-204ENST00000562576 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
CNEP1R1-204ENST00000562576 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
CNEP1R1-204ENST00000562576 BCANQ96GW7 911 aa11.18□□□□□ -0.62
CNEP1R1-204ENST00000562576 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
CNEP1R1-204ENST00000562576 DIP2AQ14689 1571 aa11.17□□□□□ -0.62
CNEP1R1-204ENST00000562576 MAST1Q9Y2H9 1570 aa11.17□□□□□ -0.62
CNEP1R1-204ENST00000562576 RBM6P78332 1123 aaKnown RBP11.17□□□□□ -0.62
CNEP1R1-204ENST00000562576 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
CNEP1R1-204ENST00000562576 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
CNEP1R1-204ENST00000562576 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
CNEP1R1-204ENST00000562576 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
CNEP1R1-204ENST00000562576 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
CNEP1R1-204ENST00000562576 POTEB2H3BUK9 544 aa11.15□□□□□ -0.62
CNEP1R1-204ENST00000562576 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
CNEP1R1-204ENST00000562576 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
CNEP1R1-204ENST00000562576 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
CNEP1R1-204ENST00000562576 KDM5AP29375 1690 aaKnown RBP11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 EP400Q96L91 3159 aa11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 NKTRP30414 1462 aaKnown RBP11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 ADAMTS2O95450 1211 aa11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
CNEP1R1-204ENST00000562576 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
CNEP1R1-204ENST00000562576 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
CNEP1R1-204ENST00000562576 EFCAB6Q5THR3 1501 aa11.13□□□□□ -0.63
CNEP1R1-204ENST00000562576 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
CNEP1R1-204ENST00000562576 CEP162Q5TB80 1403 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms