RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 VWDEQ8N2E2 1590 aa12.4□□□□□ -0.42
PSEN1-223ENST00000557511 ANKLE2Q86XL3 938 aa12.4□□□□□ -0.42
PSEN1-223ENST00000557511 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
PSEN1-223ENST00000557511 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.43
PSEN1-223ENST00000557511 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
PSEN1-223ENST00000557511 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
PSEN1-223ENST00000557511 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
PSEN1-223ENST00000557511 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
PSEN1-223ENST00000557511 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
PSEN1-223ENST00000557511 PLA2R1Q13018 1463 aa12.38□□□□□ -0.43
PSEN1-223ENST00000557511 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
PSEN1-223ENST00000557511 TET3O43151 1660 aa12.37□□□□□ -0.43
PSEN1-223ENST00000557511 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
PSEN1-223ENST00000557511 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
PSEN1-223ENST00000557511 PTPRTO14522 1441 aa12.36□□□□□ -0.43
PSEN1-223ENST00000557511 IDI1Q13907 227 aa12.35□□□□□ -0.43
PSEN1-223ENST00000557511 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
PSEN1-223ENST00000557511 NOS1P29475 1434 aa12.35□□□□□ -0.43
PSEN1-223ENST00000557511 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
PSEN1-223ENST00000557511 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
PSEN1-223ENST00000557511 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
PSEN1-223ENST00000557511 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
PSEN1-223ENST00000557511 BCANQ96GW7 911 aa12.32□□□□□ -0.44
PSEN1-223ENST00000557511 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-223ENST00000557511 PROM2Q8N271 834 aa12.3□□□□□ -0.44
PSEN1-223ENST00000557511 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
PSEN1-223ENST00000557511 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
PSEN1-223ENST00000557511 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-223ENST00000557511 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
PSEN1-223ENST00000557511 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
PSEN1-223ENST00000557511 SYNMO15061 1565 aa12.29□□□□□ -0.44
PSEN1-223ENST00000557511 PIK3C2BO00750 1634 aa12.29□□□□□ -0.44
PSEN1-223ENST00000557511 E9PCH4 1651 aa12.29□□□□□ -0.44
PSEN1-223ENST00000557511 MPHOSPH9Q99550 1183 aa12.28□□□□□ -0.44
PSEN1-223ENST00000557511 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
PSEN1-223ENST00000557511 ADGRB3O60242 1522 aa12.27□□□□□ -0.44
PSEN1-223ENST00000557511 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
PSEN1-223ENST00000557511 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
PSEN1-223ENST00000557511 RAB3GAP2Q9H2M9 1393 aa12.27□□□□□ -0.45
PSEN1-223ENST00000557511 SLIT1O75093 1534 aa12.26□□□□□ -0.45
PSEN1-223ENST00000557511 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
PSEN1-223ENST00000557511 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-223ENST00000557511 HRCP23327 699 aa12.25□□□□□ -0.45
PSEN1-223ENST00000557511 LTKP29376 864 aa12.25□□□□□ -0.45
PSEN1-223ENST00000557511 MED14O60244 1454 aa12.25□□□□□ -0.45
PSEN1-223ENST00000557511 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
PSEN1-223ENST00000557511 ZNF335Q9H4Z2 1342 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-223ENST00000557511 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
PSEN1-223ENST00000557511 SPHKAPQ2M3C7 1700 aa12.23□□□□□ -0.45
PSEN1-223ENST00000557511 TRPM2O94759 1503 aa12.22□□□□□ -0.45
PSEN1-223ENST00000557511 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
PSEN1-223ENST00000557511 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
PSEN1-223ENST00000557511 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
PSEN1-223ENST00000557511 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
PSEN1-223ENST00000557511 IQGAP1P46940 1657 aa12.21□□□□□ -0.45
PSEN1-223ENST00000557511 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
PSEN1-223ENST00000557511 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
PSEN1-223ENST00000557511 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-223ENST00000557511 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-223ENST00000557511 POTEHQ6S545 545 aa12.2□□□□□ -0.46
PSEN1-223ENST00000557511 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
PSEN1-223ENST00000557511 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-223ENST00000557511 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
PSEN1-223ENST00000557511 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
PSEN1-223ENST00000557511 CPS1P31327 1500 aa12.18□□□□□ -0.46
PSEN1-223ENST00000557511 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
PSEN1-223ENST00000557511 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
PSEN1-223ENST00000557511 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
PSEN1-223ENST00000557511 CLTCL1P53675 1640 aa12.16□□□□□ -0.46
PSEN1-223ENST00000557511 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
PSEN1-223ENST00000557511 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
PSEN1-223ENST00000557511 TBX22Q9Y458 520 aa12.16□□□□□ -0.46
PSEN1-223ENST00000557511 LTBP4Q8N2S1 1624 aa12.15□□□□□ -0.46
PSEN1-223ENST00000557511 UBAP1LF5GYI3 381 aa12.15□□□□□ -0.46
PSEN1-223ENST00000557511 KCNA6P17658 529 aa12.15□□□□□ -0.46
PSEN1-223ENST00000557511 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-223ENST00000557511 KIF1BO60333 1816 aa12.15□□□□□ -0.46
PSEN1-223ENST00000557511 TOM1O60784 492 aa12.14□□□□□ -0.47
PSEN1-223ENST00000557511 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-223ENST00000557511 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
PSEN1-223ENST00000557511 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
PSEN1-223ENST00000557511 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
PSEN1-223ENST00000557511 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
PSEN1-223ENST00000557511 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
PSEN1-223ENST00000557511 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
PSEN1-223ENST00000557511 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
PSEN1-223ENST00000557511 MIER1Q8N108 512 aa12.09□□□□□ -0.47
PSEN1-223ENST00000557511 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
PSEN1-223ENST00000557511 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
PSEN1-223ENST00000557511 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
PSEN1-223ENST00000557511 ADAMTS13Q76LX8 1427 aa12.08□□□□□ -0.48
PSEN1-223ENST00000557511 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
PSEN1-223ENST00000557511 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
PSEN1-223ENST00000557511 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
PSEN1-223ENST00000557511 MSH6P52701 1360 aa12.06□□□□□ -0.48
PSEN1-223ENST00000557511 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
PSEN1-223ENST00000557511 SETBP1Q9Y6X0 1596 aa12.06□□□□□ -0.48
PSEN1-223ENST00000557511 SPATA31E1Q6ZUB1 1445 aa12.06□□□□□ -0.48
PSEN1-223ENST00000557511 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
PSEN1-223ENST00000557511 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms