RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 TNRQ92752 1358 aa8.06□□□□□ -1.12
NPIPB4-219ENST00000543660 LRRIQ1Q96JM4 1722 aa8.06□□□□□ -1.12
NPIPB4-219ENST00000543660 NPHP4O75161 1426 aaPredicted RBP8.05□□□□□ -1.12
NPIPB4-219ENST00000543660 ATP7AQ04656 1500 aa8.05□□□□□ -1.12
NPIPB4-219ENST00000543660 SYCP2Q9BX26 1530 aa8.05□□□□□ -1.12
NPIPB4-219ENST00000543660 CDC42BPAQ5VT25 1732 aa8.04□□□□□ -1.12
NPIPB4-219ENST00000543660 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
NPIPB4-219ENST00000543660 INO80Q9ULG1 1556 aaPredicted RBP8.04□□□□□ -1.12
NPIPB4-219ENST00000543660 STRCP1A6NGW2 1772 aa8.04□□□□□ -1.12
NPIPB4-219ENST00000543660 KIAA1107Q9UPP5 1409 aa8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 MAP3K13O43283 966 aa8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 BCANQ96GW7 911 aa8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 RNF17Q9BXT8 1623 aaKnown RBP8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
NPIPB4-219ENST00000543660 PZPP20742 1482 aa8.02□□□□□ -1.13
NPIPB4-219ENST00000543660 MIA2Q96PC5 1412 aa8.02□□□□□ -1.13
NPIPB4-219ENST00000543660 SETD1AO15047 1707 aaKnown RBP8.01□□□□□ -1.13
NPIPB4-219ENST00000543660 UBTFP17480 764 aaKnown RBP8.01□□□□□ -1.13
NPIPB4-219ENST00000543660 UGGT1Q9NYU2 1555 aa8.01□□□□□ -1.13
NPIPB4-219ENST00000543660 NLRP1Q9C000 1473 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 DHX29Q7Z478 1369 aaKnown RBP8□□□□□ -1.13
NPIPB4-219ENST00000543660 FAM135AQ9P2D6 1515 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 IQGAP1P46940 1657 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 SEC24BO95487 1268 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 SGIP1Q9BQI5 828 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 TRPC6Q9Y210 931 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 FAM135BQ49AJ0 1406 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 CASKIN1Q8WXD9 1431 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 SYNMO15061 1565 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 PLEKHH2Q8IVE3 1493 aa8□□□□□ -1.13
NPIPB4-219ENST00000543660 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 IER5LQ5T953 404 aa7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 MIER1Q8N108 512 aa7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 UPF1Q92900 1129 aaKnown RBP eCLIP7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 DAXXQ9UER7 740 aaPredicted RBP7.99□□□□□ -1.13
NPIPB4-219ENST00000543660 ADGBQ8N7X0 1667 aa7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 KIF3BO15066 747 aa7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 ZNF644Q9H582 1327 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 WASHC2CQ9Y4E1 1318 aa7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 KDM5DQ9BY66 1539 aa7.98□□□□□ -1.13
NPIPB4-219ENST00000543660 RTEL1-TNFRSF6BF6WH68 1400 aa7.97□□□□□ -1.13
NPIPB4-219ENST00000543660 MBD5Q9P267 1494 aa7.97□□□□□ -1.13
NPIPB4-219ENST00000543660 ZC3H13Q5T200 1668 aaKnown RBP7.96□□□□□ -1.13
NPIPB4-219ENST00000543660 COLQQ9Y215 455 aaPredicted RBP7.96□□□□□ -1.14
NPIPB4-219ENST00000543660 XIRP1Q702N8 1843 aaKnown RBP7.96□□□□□ -1.14
NPIPB4-219ENST00000543660 CCNB3Q8WWL7 1395 aa7.96□□□□□ -1.14
NPIPB4-219ENST00000543660 LTKP29376 864 aa7.95□□□□□ -1.14
NPIPB4-219ENST00000543660 FKBP8Q14318 412 aa7.94□□□□□ -1.14
NPIPB4-219ENST00000543660 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
NPIPB4-219ENST00000543660 PLCB2Q00722 1185 aa7.93□□□□□ -1.14
NPIPB4-219ENST00000543660 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
NPIPB4-219ENST00000543660 SCAF11Q99590 1463 aaKnown RBP7.93□□□□□ -1.14
NPIPB4-219ENST00000543660 FYCO1Q9BQS8 1478 aa7.93□□□□□ -1.14
NPIPB4-219ENST00000543660 ROBO1Q9Y6N7 1651 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 ZBTB47Q9UFB7 747 aaPredicted RBP7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 PCDHB13Q9Y5F0 798 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 JCADQ9P266 1359 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 NCOA2Q15596 1464 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 ARHGAP23Q9P227 1491 aa7.92□□□□□ -1.14
NPIPB4-219ENST00000543660 TRIM52Q96A61 297 aa7.91□□□□□ -1.14
NPIPB4-219ENST00000543660 ERVK-7P63135 1459 aa7.91□□□□□ -1.14
NPIPB4-219ENST00000543660 SLIT1O75093 1534 aa7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 KCNA6P17658 529 aa7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 ZNF772Q68DY9 489 aaPredicted RBP7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 RBM33Q96EV2 1170 aaKnown RBP7.9□□□□□ -1.14
NPIPB4-219ENST00000543660 UBR1Q8IWV7 1749 aa7.89□□□□□ -1.15
NPIPB4-219ENST00000543660 LRP6O75581 1613 aa7.89□□□□□ -1.15
NPIPB4-219ENST00000543660 ABCC3O15438 1527 aa7.89□□□□□ -1.15
NPIPB4-219ENST00000543660 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
NPIPB4-219ENST00000543660 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
NPIPB4-219ENST00000543660 TIAM1Q13009 1591 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 LRRC9Q6ZRR7 1453 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 MTUS2Q5JR59 1369 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 RXRBP28702 533 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 RSPH4AQ5TD94 716 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 SLAIN1Q8ND83 568 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
NPIPB4-219ENST00000543660 CCDC141Q6ZP82 1450 aa7.87□□□□□ -1.15
NPIPB4-219ENST00000543660 SPATA31A6Q5VVP1 1343 aa7.87□□□□□ -1.15
NPIPB4-219ENST00000543660 PRDM15P57071 1507 aaPredicted RBP7.87□□□□□ -1.15
NPIPB4-219ENST00000543660 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 TMEM2Q9UHN6 1383 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 ST18O60284 1047 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 PLCG2P16885 1265 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 NUBP1P53384 320 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 SLC26A8Q96RN1 970 aa7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 CDK12Q9NYV4 1490 aaPredicted RBP7.86□□□□□ -1.15
NPIPB4-219ENST00000543660 COL16A1Q07092 1604 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms