RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
LRP6-205ENST00000540527 DSG2Q14126 1118 aa13.93□□□□□ -0.18
LRP6-205ENST00000540527 ZNF326Q5BKZ1 582 aaKnown RBP13.92□□□□□ -0.18
LRP6-205ENST00000540527 PHOX2BQ99453 314 aa13.91□□□□□ -0.18
LRP6-205ENST00000540527 TBC1D2Q9BYX2 928 aa13.91□□□□□ -0.18
LRP6-205ENST00000540527 PTGER2P43116 358 aa13.9□□□□□ -0.18
LRP6-205ENST00000540527 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
LRP6-205ENST00000540527 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
LRP6-205ENST00000540527 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
LRP6-205ENST00000540527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.194e-7■□□□□ 9.2
LRP6-205ENST00000540527 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
LRP6-205ENST00000540527 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
LRP6-205ENST00000540527 TUSC1Q2TAM9 212 aa13.86□□□□□ -0.19
LRP6-205ENST00000540527 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
LRP6-205ENST00000540527 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
LRP6-205ENST00000540527 NPAS4Q8IUM7 802 aa13.86□□□□□ -0.19
LRP6-205ENST00000540527 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
LRP6-205ENST00000540527 NDUFB9Q9Y6M9 179 aa13.86□□□□□ -0.19
LRP6-205ENST00000540527 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
LRP6-205ENST00000540527 RECKO95980 971 aa13.85□□□□□ -0.19
LRP6-205ENST00000540527 MARSP56192 900 aaKnown RBP13.85□□□□□ -0.19
LRP6-205ENST00000540527 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
LRP6-205ENST00000540527 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
LRP6-205ENST00000540527 NOP9Q86U38 636 aaKnown RBP13.85□□□□□ -0.19
LRP6-205ENST00000540527 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
LRP6-205ENST00000540527 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
LRP6-205ENST00000540527 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
LRP6-205ENST00000540527 ALG2Q9H553 416 aa13.84□□□□□ -0.19
LRP6-205ENST00000540527 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 FOXK1P85037 733 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 PHLDB3Q6NSJ2 640 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 UCN2Q96RP3 112 aa13.83□□□□□ -0.2
LRP6-205ENST00000540527 PRIM1P49642 420 aaKnown RBP13.82□□□□□ -0.2
LRP6-205ENST00000540527 ELOAQ14241 798 aaKnown RBP13.82□□□□□ -0.2
LRP6-205ENST00000540527 PRDM16Q9HAZ2 1276 aa13.82□□□□□ -0.2
LRP6-205ENST00000540527 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
LRP6-205ENST00000540527 MAFBQ9Y5Q3 323 aaPredicted RBP13.81□□□□□ -0.2
LRP6-205ENST00000540527 ANKRD33BA6NCL7 494 aa13.8□□□□□ -0.2
LRP6-205ENST00000540527 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
LRP6-205ENST00000540527 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
LRP6-205ENST00000540527 DDX12PQ92771 950 aa13.79□□□□□ -0.2
LRP6-205ENST00000540527 TMA7Q9Y2S6 64 aaKnown RBP13.78□□□□□ -0.2
LRP6-205ENST00000540527 AP1G2O75843 785 aa13.77□□□□□ -0.21
LRP6-205ENST00000540527 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
LRP6-205ENST00000540527 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
LRP6-205ENST00000540527 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
LRP6-205ENST00000540527 RAB11FIP3O75154 756 aa13.75□□□□□ -0.21
LRP6-205ENST00000540527 TMEM164Q5U3C3 297 aa13.75□□□□□ -0.21
LRP6-205ENST00000540527 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
LRP6-205ENST00000540527 C7P10643 843 aa13.74□□□□□ -0.21
LRP6-205ENST00000540527 ERCC5P28715 1186 aaPredicted RBP13.74□□□□□ -0.21
LRP6-205ENST00000540527 VAC14Q08AM6 782 aa13.74□□□□□ -0.21
LRP6-205ENST00000540527 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
LRP6-205ENST00000540527 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
LRP6-205ENST00000540527 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
LRP6-205ENST00000540527 CUEDC1Q9NWM3 386 aaPredicted RBP13.73□□□□□ -0.21
LRP6-205ENST00000540527 SPTLC1O15269 473 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 GPR37L1O60883 481 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 SSFA2P28290 1259 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 SOX11P35716 441 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 EXOC8Q8IYI6 725 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 METTL14Q9HCE5 456 aaKnown RBP13.72□□□□□ -0.21
LRP6-205ENST00000540527 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
LRP6-205ENST00000540527 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
LRP6-205ENST00000540527 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
LRP6-205ENST00000540527 TPD52L2O43399 206 aaKnown RBP13.7□□□□□ -0.22
LRP6-205ENST00000540527 PLPP6Q8IY26 295 aa13.7□□□□□ -0.22
LRP6-205ENST00000540527 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
LRP6-205ENST00000540527 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
LRP6-205ENST00000540527 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
LRP6-205ENST00000540527 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
LRP6-205ENST00000540527 STK32AQ8WU08 396 aa13.69□□□□□ -0.22
LRP6-205ENST00000540527 CDCA7Q9BWT1 371 aaPredicted RBP13.69□□□□□ -0.22
LRP6-205ENST00000540527 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
LRP6-205ENST00000540527 GORABQ5T7V8 394 aa13.68□□□□□ -0.22
LRP6-205ENST00000540527 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
LRP6-205ENST00000540527 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
LRP6-205ENST00000540527 LILRB3O75022 631 aa13.67□□□□□ -0.22
LRP6-205ENST00000540527 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
LRP6-205ENST00000540527 TSNAXIP1Q2TAA8 658 aa13.67□□□□□ -0.22
LRP6-205ENST00000540527 PRR7Q8TB68 274 aa13.67□□□□□ -0.22
LRP6-205ENST00000540527 OATP04181 439 aa13.66□□□□□ -0.22
LRP6-205ENST00000540527 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
LRP6-205ENST00000540527 SPIRE2Q8WWL2 714 aa13.66□□□□□ -0.22
LRP6-205ENST00000540527 BIN2Q9UBW5 565 aaPredicted RBP13.66□□□□□ -0.22
LRP6-205ENST00000540527 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRP6-205ENST00000540527 ATP9BO43861 1147 aa13.65□□□□□ -0.22
LRP6-205ENST00000540527 KANK4Q5T7N3 995 aaPredicted RBP13.65□□□□□ -0.22
LRP6-205ENST00000540527 MAP3K13O43283 966 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 SERPINB4P48594 390 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 QPCTQ16769 361 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
LRP6-205ENST00000540527 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms