RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 VWDEQ8N2E2 1590 aa9.13□□□□□ -0.95
HMGCL-206ENST00000496907 LRRC7Q96NW7 1537 aa9.13□□□□□ -0.95
HMGCL-206ENST00000496907 DAPK1P53355 1430 aa9.13□□□□□ -0.95
HMGCL-206ENST00000496907 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
HMGCL-206ENST00000496907 ROCK1Q13464 1354 aa9.12□□□□□ -0.95
HMGCL-206ENST00000496907 TNRQ92752 1358 aa9.12□□□□□ -0.95
HMGCL-206ENST00000496907 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
HMGCL-206ENST00000496907 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
HMGCL-206ENST00000496907 RRP7BPQ9NSQ0 103 aa9.11□□□□□ -0.95
HMGCL-206ENST00000496907 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
HMGCL-206ENST00000496907 ITGAEP38570 1179 aa9.1□□□□□ -0.95
HMGCL-206ENST00000496907 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
HMGCL-206ENST00000496907 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
HMGCL-206ENST00000496907 NPHP4O75161 1426 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-206ENST00000496907 SYNMO15061 1565 aa9.1□□□□□ -0.95
HMGCL-206ENST00000496907 MAST1Q9Y2H9 1570 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 KIF3BO15066 747 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
HMGCL-206ENST00000496907 CHADLQ6NUI6 762 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 KIF15Q9NS87 1388 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 STRCP1A6NGW2 1772 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
HMGCL-206ENST00000496907 UGGT1Q9NYU2 1555 aa9.08□□□□□ -0.96
HMGCL-206ENST00000496907 HRCP23327 699 aa9.08□□□□□ -0.96
HMGCL-206ENST00000496907 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
HMGCL-206ENST00000496907 THEMISQ8N1K5 641 aaPredicted RBP9.08□□□□□ -0.96
HMGCL-206ENST00000496907 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
HMGCL-206ENST00000496907 ADGRL2O95490 1459 aa9.08□□□□□ -0.96
HMGCL-206ENST00000496907 PZPP20742 1482 aa9.08□□□□□ -0.96
HMGCL-206ENST00000496907 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
HMGCL-206ENST00000496907 DUOX2Q9NRD8 1548 aa9.07□□□□□ -0.96
HMGCL-206ENST00000496907 RXRBP28702 533 aa9.07□□□□□ -0.96
HMGCL-206ENST00000496907 MEX3CQ5U5Q3 659 aaKnown RBP9.07□□□□□ -0.96
HMGCL-206ENST00000496907 KANK1Q14678 1352 aa9.07□□□□□ -0.96
HMGCL-206ENST00000496907 MED14O60244 1454 aa9.07□□□□□ -0.96
HMGCL-206ENST00000496907 ERBINQ96RT1 1412 aa9.06□□□□□ -0.96
HMGCL-206ENST00000496907 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
HMGCL-206ENST00000496907 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
HMGCL-206ENST00000496907 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
HMGCL-206ENST00000496907 NUTM2BA6NNL0 878 aaPredicted RBP9.05□□□□□ -0.96
HMGCL-206ENST00000496907 NUTM2EB1AL46 878 aaPredicted RBP9.05□□□□□ -0.96
HMGCL-206ENST00000496907 NUTM2DQ5VT03 806 aaPredicted RBP9.05□□□□□ -0.96
HMGCL-206ENST00000496907 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
HMGCL-206ENST00000496907 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
HMGCL-206ENST00000496907 ZNF772Q68DY9 489 aaPredicted RBP9.04□□□□□ -0.96
HMGCL-206ENST00000496907 YY1P25490 414 aa9.03□□□□□ -0.96
HMGCL-206ENST00000496907 ZC3H13Q5T200 1668 aaKnown RBP9.02□□□□□ -0.97
HMGCL-206ENST00000496907 CLCN6P51797 869 aa9.02□□□□□ -0.97
HMGCL-206ENST00000496907 SPDYE1Q8NFV5 336 aaPredicted RBP9.02□□□□□ -0.97
HMGCL-206ENST00000496907 XIRP1Q702N8 1843 aaKnown RBP9.01□□□□□ -0.97
HMGCL-206ENST00000496907 SENP3-EIF4A1A0A087X0R7 540 aa9.01□□□□□ -0.97
HMGCL-206ENST00000496907 HFM1A2PYH4 1435 aa9.01□□□□□ -0.97
HMGCL-206ENST00000496907 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
HMGCL-206ENST00000496907 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
HMGCL-206ENST00000496907 LRP6O75581 1613 aa9.01□□□□□ -0.97
HMGCL-206ENST00000496907 NAIPQ13075 1403 aa8.99□□□□□ -0.97
HMGCL-206ENST00000496907 FAM135BQ49AJ0 1406 aa8.99□□□□□ -0.97
HMGCL-206ENST00000496907 SETD5Q9C0A6 1442 aa8.99□□□□□ -0.97
HMGCL-206ENST00000496907 ROBO1Q9Y6N7 1651 aa8.99□□□□□ -0.97
HMGCL-206ENST00000496907 NUP155O75694 1391 aa8.99□□□□□ -0.97
HMGCL-206ENST00000496907 EIF2AK4Q9P2K8 1649 aaKnown RBP8.98□□□□□ -0.97
HMGCL-206ENST00000496907 RGS12O14924 1447 aa8.98□□□□□ -0.97
HMGCL-206ENST00000496907 SCAF11Q99590 1463 aaKnown RBP8.98□□□□□ -0.97
HMGCL-206ENST00000496907 UBR1Q8IWV7 1749 aa8.98□□□□□ -0.97
HMGCL-206ENST00000496907 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
HMGCL-206ENST00000496907 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
HMGCL-206ENST00000496907 JCADQ9P266 1359 aa8.97□□□□□ -0.97
HMGCL-206ENST00000496907 ERVK-7P63135 1459 aa8.96□□□□□ -0.97
HMGCL-206ENST00000496907 ABCC3O15438 1527 aa8.96□□□□□ -0.97
HMGCL-206ENST00000496907 SLC52A1Q9NWF4 448 aa8.96□□□□□ -0.98
HMGCL-206ENST00000496907 ARHGAP31Q2M1Z3 1444 aa8.96□□□□□ -0.98
HMGCL-206ENST00000496907 CDK12Q9NYV4 1490 aaPredicted RBP8.96□□□□□ -0.98
HMGCL-206ENST00000496907 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
HMGCL-206ENST00000496907 CEP152O94986 1710 aa8.95□□□□□ -0.98
HMGCL-206ENST00000496907 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
HMGCL-206ENST00000496907 TMEM94Q12767 1356 aa8.95□□□□□ -0.98
HMGCL-206ENST00000496907 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
HMGCL-206ENST00000496907 EID1Q9Y6B2 187 aa8.94□□□□□ -0.98
HMGCL-206ENST00000496907 LTKP29376 864 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
HMGCL-206ENST00000496907 MPHOSPH9Q99550 1183 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 ATAD2Q6PL18 1390 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 RPRD2Q5VT52 1461 aaKnown RBP8.93□□□□□ -0.98
HMGCL-206ENST00000496907 SLIT1O75093 1534 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 LMTK2Q8IWU2 1503 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 LRP5O75197 1615 aa8.93□□□□□ -0.98
HMGCL-206ENST00000496907 ARHGAP23Q9P227 1491 aa8.92□□□□□ -0.98
HMGCL-206ENST00000496907 RAB3GAP2Q9H2M9 1393 aa8.92□□□□□ -0.98
HMGCL-206ENST00000496907 AFF2P51816 1311 aa8.92□□□□□ -0.98
HMGCL-206ENST00000496907 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
HMGCL-206ENST00000496907 EP400Q96L91 3159 aa8.91□□□□□ -0.98
HMGCL-206ENST00000496907 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
HMGCL-206ENST00000496907 SPDYE2BA6NHP3 402 aa8.91□□□□□ -0.98
HMGCL-206ENST00000496907 SPDYE6P0CI01 402 aa8.91□□□□□ -0.98
HMGCL-206ENST00000496907 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
HMGCL-206ENST00000496907 PIK3C2BO00750 1634 aa8.91□□□□□ -0.98
HMGCL-206ENST00000496907 MSH6P52701 1360 aa8.9□□□□□ -0.98
HMGCL-206ENST00000496907 PSDA5PKW4 1024 aaPredicted RBP8.9□□□□□ -0.98
HMGCL-206ENST00000496907 QTRT2Q9H974 415 aaKnown RBP8.9□□□□□ -0.98
HMGCL-206ENST00000496907 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms