RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 UGGT1Q9NYU2 1555 aa14.08□□□□□ -0.16
XRN1-208ENST00000470537 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
XRN1-208ENST00000470537 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
XRN1-208ENST00000470537 TIAM1Q13009 1591 aa14.07□□□□□ -0.16
XRN1-208ENST00000470537 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
XRN1-208ENST00000470537 MS4A3Q96HJ5 214 aa14.05□□□□□ -0.16
XRN1-208ENST00000470537 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
XRN1-208ENST00000470537 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
XRN1-208ENST00000470537 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
XRN1-208ENST00000470537 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
XRN1-208ENST00000470537 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
XRN1-208ENST00000470537 MIER1Q8N108 512 aa14.01□□□□□ -0.17
XRN1-208ENST00000470537 NCOA2Q15596 1464 aa14□□□□□ -0.17
XRN1-208ENST00000470537 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
XRN1-208ENST00000470537 IQGAP1P46940 1657 aa14□□□□□ -0.17
XRN1-208ENST00000470537 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
XRN1-208ENST00000470537 TXNDC2Q86VQ3 553 aa13.98□□□□□ -0.17
XRN1-208ENST00000470537 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
XRN1-208ENST00000470537 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
XRN1-208ENST00000470537 ASTLQ6HA08 431 aaPredicted RBP13.97□□□□□ -0.17
XRN1-208ENST00000470537 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
XRN1-208ENST00000470537 ZC3H13Q5T200 1668 aaKnown RBP13.97□□□□□ -0.17
XRN1-208ENST00000470537 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
XRN1-208ENST00000470537 SYNMO15061 1565 aa13.96□□□□□ -0.18
XRN1-208ENST00000470537 RNF17Q9BXT8 1623 aaKnown RBP13.95□□□□□ -0.18
XRN1-208ENST00000470537 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
XRN1-208ENST00000470537 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
XRN1-208ENST00000470537 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
XRN1-208ENST00000470537 ABCC3O15438 1527 aa13.94□□□□□ -0.18
XRN1-208ENST00000470537 METRNQ9UJH8 293 aa13.93□□□□□ -0.18
XRN1-208ENST00000470537 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
XRN1-208ENST00000470537 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
XRN1-208ENST00000470537 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
XRN1-208ENST00000470537 LTKP29376 864 aa13.91□□□□□ -0.18
XRN1-208ENST00000470537 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
XRN1-208ENST00000470537 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 KANK1Q14678 1352 aa13.9□□□□□ -0.18
XRN1-208ENST00000470537 DUOX2Q9NRD8 1548 aa13.9□□□□□ -0.19
XRN1-208ENST00000470537 C7P10643 843 aa13.89□□□□□ -0.19
XRN1-208ENST00000470537 SLIT1O75093 1534 aa13.89□□□□□ -0.19
XRN1-208ENST00000470537 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
XRN1-208ENST00000470537 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
XRN1-208ENST00000470537 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
XRN1-208ENST00000470537 UBR1Q8IWV7 1749 aa13.88□□□□□ -0.19
XRN1-208ENST00000470537 KCNA6P17658 529 aa13.88□□□□□ -0.19
XRN1-208ENST00000470537 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
XRN1-208ENST00000470537 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
XRN1-208ENST00000470537 STRCP1A6NGW2 1772 aa13.87□□□□□ -0.19
XRN1-208ENST00000470537 HDGFP51858 240 aaKnown RBP13.87□□□□□ -0.19
XRN1-208ENST00000470537 RGS17Q9UGC6 210 aaPredicted RBP13.87□□□□□ -0.19
XRN1-208ENST00000470537 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
XRN1-208ENST00000470537 KIF15Q9NS87 1388 aa13.85□□□□□ -0.19
XRN1-208ENST00000470537 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
XRN1-208ENST00000470537 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
XRN1-208ENST00000470537 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
XRN1-208ENST00000470537 BCANQ96GW7 911 aa13.84□□□□□ -0.19
XRN1-208ENST00000470537 SLC52A1Q9NWF4 448 aa13.84□□□□□ -0.19
XRN1-208ENST00000470537 MAP3K1Q13233 1512 aa13.84□□□□□ -0.19
XRN1-208ENST00000470537 TMEM94Q12767 1356 aa13.83□□□□□ -0.19
XRN1-208ENST00000470537 ATN1P54259 1190 aaPredicted RBP13.83□□□□□ -0.2
XRN1-208ENST00000470537 CEP152O94986 1710 aa13.82□□□□□ -0.2
XRN1-208ENST00000470537 MAP3K13O43283 966 aa13.82□□□□□ -0.2
XRN1-208ENST00000470537 IDI1Q13907 227 aa13.82□□□□□ -0.2
XRN1-208ENST00000470537 MSH6P52701 1360 aa13.82□□□□□ -0.2
XRN1-208ENST00000470537 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
XRN1-208ENST00000470537 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
XRN1-208ENST00000470537 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
XRN1-208ENST00000470537 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
XRN1-208ENST00000470537 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
XRN1-208ENST00000470537 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
XRN1-208ENST00000470537 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
XRN1-208ENST00000470537 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
XRN1-208ENST00000470537 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
XRN1-208ENST00000470537 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
XRN1-208ENST00000470537 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
XRN1-208ENST00000470537 FKBP8Q14318 412 aa13.78□□□□□ -0.2
XRN1-208ENST00000470537 TRPC6Q9Y210 931 aa13.78□□□□□ -0.2
XRN1-208ENST00000470537 PIK3C2BO00750 1634 aa13.77□□□□□ -0.21
XRN1-208ENST00000470537 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
XRN1-208ENST00000470537 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
XRN1-208ENST00000470537 JCADQ9P266 1359 aa13.77□□□□□ -0.21
XRN1-208ENST00000470537 ABCC5O15440 1437 aa13.76□□□□□ -0.21
XRN1-208ENST00000470537 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
XRN1-208ENST00000470537 TIE1P35590 1138 aa13.75□□□□□ -0.21
XRN1-208ENST00000470537 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
XRN1-208ENST00000470537 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
XRN1-208ENST00000470537 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
XRN1-208ENST00000470537 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
XRN1-208ENST00000470537 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
XRN1-208ENST00000470537 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
XRN1-208ENST00000470537 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
XRN1-208ENST00000470537 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.74□□□□□ -0.21
XRN1-208ENST00000470537 TET3O43151 1660 aa13.74□□□□□ -0.21
XRN1-208ENST00000470537 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
XRN1-208ENST00000470537 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
XRN1-208ENST00000470537 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms