RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
UBE4B-205ENST00000465408 PREX2Q70Z35 1606 aa12□□□□□ -0.49
UBE4B-205ENST00000465408 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
UBE4B-205ENST00000465408 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
UBE4B-205ENST00000465408 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
UBE4B-205ENST00000465408 CEP350Q5VT06 3117 aa11.98□□□□□ -0.49
UBE4B-205ENST00000465408 CROCC2H7BZ55 1655 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
UBE4B-205ENST00000465408 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 LTKP29376 864 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
UBE4B-205ENST00000465408 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
UBE4B-205ENST00000465408 ADGRL2O95490 1459 aa11.96□□□□□ -0.49
UBE4B-205ENST00000465408 MSH6P52701 1360 aa11.96□□□□□ -0.49
UBE4B-205ENST00000465408 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
UBE4B-205ENST00000465408 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.5
UBE4B-205ENST00000465408 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE4B-205ENST00000465408 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
UBE4B-205ENST00000465408 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
UBE4B-205ENST00000465408 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
UBE4B-205ENST00000465408 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
UBE4B-205ENST00000465408 KCNA6P17658 529 aa11.93□□□□□ -0.5
UBE4B-205ENST00000465408 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
UBE4B-205ENST00000465408 MBD5Q9P267 1494 aa11.92□□□□□ -0.5
UBE4B-205ENST00000465408 TIMELESSQ9UNS1 1208 aa11.92□□□□□ -0.5
UBE4B-205ENST00000465408 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-205ENST00000465408 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 CCDC141Q6ZP82 1450 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 ABCC3O15438 1527 aa11.91□□□□□ -0.5
UBE4B-205ENST00000465408 KDM5AP29375 1690 aaKnown RBP11.91□□□□□ -0.5
UBE4B-205ENST00000465408 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-205ENST00000465408 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
UBE4B-205ENST00000465408 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
UBE4B-205ENST00000465408 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
UBE4B-205ENST00000465408 SLIT1O75093 1534 aa11.89□□□□□ -0.51
UBE4B-205ENST00000465408 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
UBE4B-205ENST00000465408 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
UBE4B-205ENST00000465408 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
UBE4B-205ENST00000465408 KIF15Q9NS87 1388 aa11.88□□□□□ -0.51
UBE4B-205ENST00000465408 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
UBE4B-205ENST00000465408 WASHC2CQ9Y4E1 1318 aa11.87□□□□□ -0.51
UBE4B-205ENST00000465408 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
UBE4B-205ENST00000465408 MAST1Q9Y2H9 1570 aa11.86□□□□□ -0.51
UBE4B-205ENST00000465408 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
UBE4B-205ENST00000465408 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-205ENST00000465408 ATRNO75882 1429 aa11.85□□□□□ -0.51
UBE4B-205ENST00000465408 KIF3BO15066 747 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 MIER1Q8N108 512 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 USP21Q9UK80 565 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
UBE4B-205ENST00000465408 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
UBE4B-205ENST00000465408 ADAMTS2O95450 1211 aa11.83□□□□□ -0.52
UBE4B-205ENST00000465408 NUP155O75694 1391 aa11.82□□□□□ -0.52
UBE4B-205ENST00000465408 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
UBE4B-205ENST00000465408 TET3O43151 1660 aa11.82□□□□□ -0.52
UBE4B-205ENST00000465408 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
UBE4B-205ENST00000465408 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
UBE4B-205ENST00000465408 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
UBE4B-205ENST00000465408 SF3B2Q13435 895 aaKnown RBP11.8□□□□□ -0.52
UBE4B-205ENST00000465408 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
UBE4B-205ENST00000465408 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
UBE4B-205ENST00000465408 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-205ENST00000465408 RPRD2Q5VT52 1461 aaKnown RBP11.8□□□□□ -0.52
UBE4B-205ENST00000465408 SLC34A2O95436 690 aa11.79□□□□□ -0.52
UBE4B-205ENST00000465408 RTEL1-TNFRSF6BF6WH68 1400 aa11.78□□□□□ -0.52
UBE4B-205ENST00000465408 UTRNP46939 3433 aa11.77□□□□□ -0.52
UBE4B-205ENST00000465408 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.52
UBE4B-205ENST00000465408 UNC13BO14795 1591 aa11.77□□□□□ -0.53
UBE4B-205ENST00000465408 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
UBE4B-205ENST00000465408 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
UBE4B-205ENST00000465408 ASXL1Q8IXJ9 1541 aa11.76□□□□□ -0.53
UBE4B-205ENST00000465408 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
UBE4B-205ENST00000465408 CAMTA1Q9Y6Y1 1673 aa11.75□□□□□ -0.53
UBE4B-205ENST00000465408 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
UBE4B-205ENST00000465408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
UBE4B-205ENST00000465408 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
UBE4B-205ENST00000465408 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
UBE4B-205ENST00000465408 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
UBE4B-205ENST00000465408 ATF3P18847 181 aa11.73□□□□□ -0.53
UBE4B-205ENST00000465408 NBPF8Q3BBV2 869 aa11.73□□□□□ -0.53
UBE4B-205ENST00000465408 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
UBE4B-205ENST00000465408 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
UBE4B-205ENST00000465408 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
UBE4B-205ENST00000465408 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
UBE4B-205ENST00000465408 ERBINQ96RT1 1412 aa11.72□□□□□ -0.53
UBE4B-205ENST00000465408 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
UBE4B-205ENST00000465408 PIK3C2BO00750 1634 aa11.71□□□□□ -0.53
UBE4B-205ENST00000465408 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
UBE4B-205ENST00000465408 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
UBE4B-205ENST00000465408 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-205ENST00000465408 YTHDC1Q96MU7 727 aaKnown RBP11.71□□□□□ -0.53
UBE4B-205ENST00000465408 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
UBE4B-205ENST00000465408 BAG6P46379 1132 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms