RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ABCC1P33527 1531 aa10.67□□□□□ -0.7
BRCC3-208ENST00000453705 CCDC141Q6ZP82 1450 aa10.67□□□□□ -0.7
BRCC3-208ENST00000453705 WDR7Q9Y4E6 1490 aa10.67□□□□□ -0.7
BRCC3-208ENST00000453705 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
BRCC3-208ENST00000453705 PLEKHD1A6NEE1 506 aa10.66□□□□□ -0.7
BRCC3-208ENST00000453705 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
BRCC3-208ENST00000453705 CFAP74Q9C0B2 1584 aa10.66□□□□□ -0.7
BRCC3-208ENST00000453705 MAGI2Q86UL8 1455 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 TRAK2O60296 914 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 ANAPC15P60006 121 aa10.65□□□□□ -0.7
BRCC3-208ENST00000453705 PLCH2O75038 1416 aa10.64□□□□□ -0.71
BRCC3-208ENST00000453705 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
BRCC3-208ENST00000453705 FAM117AQ9C073 453 aa10.64□□□□□ -0.71
BRCC3-208ENST00000453705 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 PZPP20742 1482 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 NEUROD1Q13562 356 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 PROM2Q8N271 834 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 BCORL1Q5H9F3 1711 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 IQGAP3Q86VI3 1631 aa10.63□□□□□ -0.71
BRCC3-208ENST00000453705 SOCS7O14512 581 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 POLR1AO95602 1720 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-208ENST00000453705 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
BRCC3-208ENST00000453705 ANKRD30AQ9BXX3 1397 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
BRCC3-208ENST00000453705 NOL8Q76FK4 1167 aaKnown RBP10.61□□□□□ -0.71
BRCC3-208ENST00000453705 INO80Q9ULG1 1556 aaPredicted RBP10.61□□□□□ -0.71
BRCC3-208ENST00000453705 RTEL1-TNFRSF6BF6WH68 1400 aa10.61□□□□□ -0.71
BRCC3-208ENST00000453705 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
BRCC3-208ENST00000453705 FAM9BQ8IZU0 186 aa10.61□□□□□ -0.71
BRCC3-208ENST00000453705 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-208ENST00000453705 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-208ENST00000453705 CFDP1Q9UEE9 299 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-208ENST00000453705 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
BRCC3-208ENST00000453705 SYCP2Q9BX26 1530 aa10.6□□□□□ -0.71
BRCC3-208ENST00000453705 DUOX2Q9NRD8 1548 aa10.6□□□□□ -0.71
BRCC3-208ENST00000453705 RPRD2Q5VT52 1461 aaKnown RBP10.59□□□□□ -0.71
BRCC3-208ENST00000453705 SECISBP2LQ93073 1101 aaKnown RBP10.59□□□□□ -0.71
BRCC3-208ENST00000453705 SGSM3Q96HU1 749 aa10.59□□□□□ -0.71
BRCC3-208ENST00000453705 RIPOR2Q9Y4F9 1068 aa10.59□□□□□ -0.71
BRCC3-208ENST00000453705 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
BRCC3-208ENST00000453705 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
BRCC3-208ENST00000453705 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
BRCC3-208ENST00000453705 NEURL4Q96JN8 1562 aa10.58□□□□□ -0.72
BRCC3-208ENST00000453705 TEX14Q8IWB6 1497 aa10.58□□□□□ -0.72
BRCC3-208ENST00000453705 GLI2P10070 1586 aa10.57□□□□□ -0.72
BRCC3-208ENST00000453705 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
BRCC3-208ENST00000453705 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
BRCC3-208ENST00000453705 ZMYND10O75800 440 aa10.57□□□□□ -0.72
BRCC3-208ENST00000453705 CARNS1A5YM72 827 aa10.57□□□□□ -0.72
BRCC3-208ENST00000453705 MARCH6O60337 910 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 ZFYVE16Q7Z3T8 1539 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 ATP10AO60312 1499 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 ANKRD50Q9ULJ7 1429 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
BRCC3-208ENST00000453705 VWDEQ8N2E2 1590 aa10.56□□□□□ -0.72
BRCC3-208ENST00000453705 SEMA3EO15041 775 aa10.55□□□□□ -0.72
BRCC3-208ENST00000453705 IGSF5Q9NSI5 407 aa10.55□□□□□ -0.72
BRCC3-208ENST00000453705 ITGAEP38570 1179 aa10.54□□□□□ -0.72
BRCC3-208ENST00000453705 OS9Q13438 667 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-208ENST00000453705 ZNF662Q6ZS27 426 aa10.54□□□□□ -0.72
BRCC3-208ENST00000453705 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-208ENST00000453705 KDM5CP41229 1560 aa10.54□□□□□ -0.72
BRCC3-208ENST00000453705 EXOC8Q8IYI6 725 aa10.54□□□□□ -0.72
BRCC3-208ENST00000453705 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-208ENST00000453705 SLC52A1Q9NWF4 448 aa10.54□□□□□ -0.72
BRCC3-208ENST00000453705 GPATCH11Q8N954 259 aa10.53□□□□□ -0.72
BRCC3-208ENST00000453705 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
BRCC3-208ENST00000453705 U3KPZ7 1027 aaPredicted RBP10.53□□□□□ -0.72
BRCC3-208ENST00000453705 LAMC1P11047 1609 aa10.53□□□□□ -0.72
BRCC3-208ENST00000453705 ZNF644Q9H582 1327 aaPredicted RBP10.53□□□□□ -0.72
BRCC3-208ENST00000453705 PPP1R15AO75807 674 aaPredicted RBP10.53□□□□□ -0.72
BRCC3-208ENST00000453705 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
BRCC3-208ENST00000453705 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
BRCC3-208ENST00000453705 SPATA32Q96LK8 384 aa10.52□□□□□ -0.72
BRCC3-208ENST00000453705 RNF17Q9BXT8 1623 aaKnown RBP10.52□□□□□ -0.72
BRCC3-208ENST00000453705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
BRCC3-208ENST00000453705 PTMSP20962 102 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 DEKP35659 375 aaKnown RBP10.51□□□□□ -0.73
BRCC3-208ENST00000453705 FAM135AQ9P2D6 1515 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 ASXL2Q76L83 1435 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 LMTK3Q96Q04 1460 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 TET3O43151 1660 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 KIF15Q9NS87 1388 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 MAFGO15525 162 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
BRCC3-208ENST00000453705 FOSBP53539 338 aa10.5□□□□□ -0.73
BRCC3-208ENST00000453705 PRDM15P57071 1507 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-208ENST00000453705 ATP7AQ04656 1500 aa10.49□□□□□ -0.73
BRCC3-208ENST00000453705 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
BRCC3-208ENST00000453705 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
BRCC3-208ENST00000453705 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms