RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 SYNMO15061 1565 aa12.88□□□□□ -0.35
VWA3B-201ENST00000409460 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
VWA3B-201ENST00000409460 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
VWA3B-201ENST00000409460 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
VWA3B-201ENST00000409460 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
VWA3B-201ENST00000409460 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
VWA3B-201ENST00000409460 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
VWA3B-201ENST00000409460 ILDR2Q71H61 639 aa12.85□□□□□ -0.35
VWA3B-201ENST00000409460 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
VWA3B-201ENST00000409460 SLIT1O75093 1534 aa12.85□□□□□ -0.35
VWA3B-201ENST00000409460 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
VWA3B-201ENST00000409460 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
VWA3B-201ENST00000409460 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
VWA3B-201ENST00000409460 FAM135BQ49AJ0 1406 aa12.84□□□□□ -0.35
VWA3B-201ENST00000409460 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
VWA3B-201ENST00000409460 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
VWA3B-201ENST00000409460 CEP152O94986 1710 aa12.83□□□□□ -0.36
VWA3B-201ENST00000409460 JCADQ9P266 1359 aa12.83□□□□□ -0.36
VWA3B-201ENST00000409460 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
VWA3B-201ENST00000409460 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
VWA3B-201ENST00000409460 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
VWA3B-201ENST00000409460 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
VWA3B-201ENST00000409460 NOS1P29475 1434 aa12.81□□□□□ -0.36
VWA3B-201ENST00000409460 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
VWA3B-201ENST00000409460 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
VWA3B-201ENST00000409460 VWDEQ8N2E2 1590 aa12.8□□□□□ -0.36
VWA3B-201ENST00000409460 CFAP65Q6ZU64 1925 aaKnown RBP12.8□□□□□ -0.36
VWA3B-201ENST00000409460 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
VWA3B-201ENST00000409460 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
VWA3B-201ENST00000409460 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
VWA3B-201ENST00000409460 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
VWA3B-201ENST00000409460 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
VWA3B-201ENST00000409460 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
VWA3B-201ENST00000409460 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
VWA3B-201ENST00000409460 PIK3C2BO00750 1634 aa12.77□□□□□ -0.37
VWA3B-201ENST00000409460 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.37
VWA3B-201ENST00000409460 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
VWA3B-201ENST00000409460 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
VWA3B-201ENST00000409460 TET3O43151 1660 aa12.75□□□□□ -0.37
VWA3B-201ENST00000409460 TRPM2O94759 1503 aa12.75□□□□□ -0.37
VWA3B-201ENST00000409460 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
VWA3B-201ENST00000409460 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
VWA3B-201ENST00000409460 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
VWA3B-201ENST00000409460 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
VWA3B-201ENST00000409460 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
VWA3B-201ENST00000409460 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
VWA3B-201ENST00000409460 RXRBP28702 533 aa12.72□□□□□ -0.37
VWA3B-201ENST00000409460 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
VWA3B-201ENST00000409460 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
VWA3B-201ENST00000409460 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
VWA3B-201ENST00000409460 POGKQ9P215 609 aa12.68□□□□□ -0.38
VWA3B-201ENST00000409460 DCCP43146 1447 aa12.68□□□□□ -0.38
VWA3B-201ENST00000409460 RGL3Q3MIN7 710 aa12.67□□□□□ -0.38
VWA3B-201ENST00000409460 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
VWA3B-201ENST00000409460 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
VWA3B-201ENST00000409460 PSME1Q06323 249 aa12.67□□□□□ -0.38
VWA3B-201ENST00000409460 SF3B2Q13435 895 aaKnown RBP12.67□□□□□ -0.38
VWA3B-201ENST00000409460 NPHP3Q7Z494 1330 aa12.66□□□□□ -0.38
VWA3B-201ENST00000409460 UNC13BO14795 1591 aa12.66□□□□□ -0.38
VWA3B-201ENST00000409460 ZFYVE9O95405 1425 aa12.66□□□□□ -0.38
VWA3B-201ENST00000409460 C8orf37Q96NL8 207 aa12.65□□□□□ -0.38
VWA3B-201ENST00000409460 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
VWA3B-201ENST00000409460 STK26Q9P289 416 aa12.65□□□□□ -0.38
VWA3B-201ENST00000409460 HFM1A2PYH4 1435 aa12.65□□□□□ -0.38
VWA3B-201ENST00000409460 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
VWA3B-201ENST00000409460 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
VWA3B-201ENST00000409460 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
VWA3B-201ENST00000409460 A0A0G2JS52 829 aa12.64□□□□□ -0.39
VWA3B-201ENST00000409460 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
VWA3B-201ENST00000409460 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
VWA3B-201ENST00000409460 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
VWA3B-201ENST00000409460 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
VWA3B-201ENST00000409460 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
VWA3B-201ENST00000409460 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
VWA3B-201ENST00000409460 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
VWA3B-201ENST00000409460 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
VWA3B-201ENST00000409460 DHX57Q6P158 1386 aaKnown RBP12.61□□□□□ -0.39
VWA3B-201ENST00000409460 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
VWA3B-201ENST00000409460 AFF2P51816 1311 aa12.6□□□□□ -0.39
VWA3B-201ENST00000409460 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
VWA3B-201ENST00000409460 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
VWA3B-201ENST00000409460 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
VWA3B-201ENST00000409460 POTEAQ6S8J7 498 aa12.59□□□□□ -0.39
VWA3B-201ENST00000409460 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
VWA3B-201ENST00000409460 MPHOSPH9Q99550 1183 aa12.58□□□□□ -0.4
VWA3B-201ENST00000409460 PHLPP1O60346 1717 aa12.58□□□□□ -0.4
VWA3B-201ENST00000409460 USP21Q9UK80 565 aa12.58□□□□□ -0.4
VWA3B-201ENST00000409460 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
VWA3B-201ENST00000409460 NAIPQ13075 1403 aa12.56□□□□□ -0.4
VWA3B-201ENST00000409460 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
VWA3B-201ENST00000409460 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
VWA3B-201ENST00000409460 E9PCH4 1651 aa12.54□□□□□ -0.4
VWA3B-201ENST00000409460 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
VWA3B-201ENST00000409460 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
VWA3B-201ENST00000409460 METP08581 1390 aa12.53□□□□□ -0.4
VWA3B-201ENST00000409460 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
VWA3B-201ENST00000409460 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.4
VWA3B-201ENST00000409460 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.4
VWA3B-201ENST00000409460 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
VWA3B-201ENST00000409460 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms