RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 MYOM3Q5VTT5 1437 aa8.69□□□□□ -1.02
CLIP4-202ENST00000401605 IGSF3O75054 1194 aa8.69□□□□□ -1.02
CLIP4-202ENST00000401605 SETD1BQ9UPS6 1966 aaKnown RBP8.69□□□□□ -1.02
CLIP4-202ENST00000401605 GLIPR1L2Q4G1C9 344 aa8.69□□□□□ -1.02
CLIP4-202ENST00000401605 CIZ1Q9ULV3 898 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-202ENST00000401605 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
CLIP4-202ENST00000401605 MROH2AA6NES4 1674 aa8.68□□□□□ -1.02
CLIP4-202ENST00000401605 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
CLIP4-202ENST00000401605 FAM135AQ9P2D6 1515 aa8.68□□□□□ -1.02
CLIP4-202ENST00000401605 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
CLIP4-202ENST00000401605 PLA2R1Q13018 1463 aa8.67□□□□□ -1.02
CLIP4-202ENST00000401605 ADGBQ8N7X0 1667 aa8.67□□□□□ -1.02
CLIP4-202ENST00000401605 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
CLIP4-202ENST00000401605 TNRQ92752 1358 aa8.67□□□□□ -1.02
CLIP4-202ENST00000401605 NCKAP5LQ9HCH0 1330 aa8.67□□□□□ -1.02
CLIP4-202ENST00000401605 KCNV2Q8TDN2 545 aa8.66□□□□□ -1.02
CLIP4-202ENST00000401605 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-202ENST00000401605 CAMSAP1Q5T5Y3 1602 aa8.66□□□□□ -1.02
CLIP4-202ENST00000401605 KDM5DQ9BY66 1539 aa8.66□□□□□ -1.02
CLIP4-202ENST00000401605 PZPP20742 1482 aa8.66□□□□□ -1.02
CLIP4-202ENST00000401605 A2ML1A8K2U0 1454 aa8.66□□□□□ -1.02
CLIP4-202ENST00000401605 STRCQ7RTU9 1775 aa8.65□□□□□ -1.02
CLIP4-202ENST00000401605 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
CLIP4-202ENST00000401605 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.03
CLIP4-202ENST00000401605 TCOF1Q13428 1488 aaKnown RBP8.65□□□□□ -1.03
CLIP4-202ENST00000401605 U3KPZ7 1027 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-202ENST00000401605 AAMPQ13685 434 aa8.64□□□□□ -1.03
CLIP4-202ENST00000401605 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-202ENST00000401605 CCDC136Q96JN2 1154 aa8.64□□□□□ -1.03
CLIP4-202ENST00000401605 MAST1Q9Y2H9 1570 aa8.63□□□□□ -1.03
CLIP4-202ENST00000401605 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
CLIP4-202ENST00000401605 KIF15Q9NS87 1388 aa8.63□□□□□ -1.03
CLIP4-202ENST00000401605 ZNF335Q9H4Z2 1342 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-202ENST00000401605 MYO3AQ8NEV4 1616 aa8.63□□□□□ -1.03
CLIP4-202ENST00000401605 ABCC5O15440 1437 aa8.63□□□□□ -1.03
CLIP4-202ENST00000401605 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 IQSEC2Q5JU85 1478 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 NLRP1Q9C000 1473 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 FGD6Q6ZV73 1430 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
CLIP4-202ENST00000401605 ANKLE2Q86XL3 938 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 RRP7BPQ9NSQ0 103 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 SHANK2Q9UPX8 1470 aa8.62□□□□□ -1.03
CLIP4-202ENST00000401605 DUOX2Q9NRD8 1548 aa8.61□□□□□ -1.03
CLIP4-202ENST00000401605 APBB1O00213 710 aa8.61□□□□□ -1.03
CLIP4-202ENST00000401605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLIP4-202ENST00000401605 ZNF142P52746 1687 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-202ENST00000401605 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
CLIP4-202ENST00000401605 ABCC3O15438 1527 aa8.61□□□□□ -1.03
CLIP4-202ENST00000401605 DAPK1P53355 1430 aa8.6□□□□□ -1.03
CLIP4-202ENST00000401605 ANKRD30AQ9BXX3 1397 aa8.6□□□□□ -1.03
CLIP4-202ENST00000401605 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
CLIP4-202ENST00000401605 DNMT1P26358 1616 aaKnown RBP8.59□□□□□ -1.03
CLIP4-202ENST00000401605 RNF17Q9BXT8 1623 aaKnown RBP8.59□□□□□ -1.03
CLIP4-202ENST00000401605 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
CLIP4-202ENST00000401605 ERVK-7P63135 1459 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLIP4-202ENST00000401605 ARHGAP31Q2M1Z3 1444 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 UGGT1Q9NYU2 1555 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
CLIP4-202ENST00000401605 KANK1Q14678 1352 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 A0A0U1RQG5 324 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-202ENST00000401605 UBAP1LF5GYI3 381 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 PTPN23Q9H3S7 1636 aa8.58□□□□□ -1.04
CLIP4-202ENST00000401605 SPATA31D1Q6ZQQ2 1576 aa8.57□□□□□ -1.04
CLIP4-202ENST00000401605 HSP90B1P14625 803 aaKnown RBP8.57□□□□□ -1.04
CLIP4-202ENST00000401605 FAM50AQ14320 339 aaKnown RBP8.57□□□□□ -1.04
CLIP4-202ENST00000401605 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
CLIP4-202ENST00000401605 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-202ENST00000401605 MROH1Q8NDA8 1641 aa8.56□□□□□ -1.04
CLIP4-202ENST00000401605 MED14O60244 1454 aa8.56□□□□□ -1.04
CLIP4-202ENST00000401605 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-202ENST00000401605 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
CLIP4-202ENST00000401605 ZC3H13Q5T200 1668 aaKnown RBP8.55□□□□□ -1.04
CLIP4-202ENST00000401605 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
CLIP4-202ENST00000401605 CPS1P31327 1500 aa8.54□□□□□ -1.04
CLIP4-202ENST00000401605 NEURL4Q96JN8 1562 aa8.54□□□□□ -1.04
CLIP4-202ENST00000401605 TOM1O60784 492 aa8.54□□□□□ -1.04
CLIP4-202ENST00000401605 EID1Q9Y6B2 187 aa8.54□□□□□ -1.04
CLIP4-202ENST00000401605 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
CLIP4-202ENST00000401605 RBM10P98175 930 aaKnown RBP8.53□□□□□ -1.04
CLIP4-202ENST00000401605 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
CLIP4-202ENST00000401605 STAG3Q9UJ98 1225 aa8.53□□□□□ -1.04
CLIP4-202ENST00000401605 DISP3Q9P2K9 1392 aa8.53□□□□□ -1.04
CLIP4-202ENST00000401605 ANKRD50Q9ULJ7 1429 aa8.53□□□□□ -1.04
CLIP4-202ENST00000401605 NAP1L5Q96NT1 182 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-202ENST00000401605 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLIP4-202ENST00000401605 LMTK2Q8IWU2 1503 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 SCAF11Q99590 1463 aaKnown RBP8.52□□□□□ -1.05
CLIP4-202ENST00000401605 LTKP29376 864 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
CLIP4-202ENST00000401605 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 RAD21O60216 631 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 IDI1Q13907 227 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 SLC52A1Q9NWF4 448 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 DEPDC5O75140 1603 aa8.52□□□□□ -1.05
CLIP4-202ENST00000401605 TMEM2Q9UHN6 1383 aa8.51□□□□□ -1.05
CLIP4-202ENST00000401605 ARHGAP23Q9P227 1491 aa8.51□□□□□ -1.05
CLIP4-202ENST00000401605 DEKP35659 375 aaKnown RBP8.51□□□□□ -1.05
CLIP4-202ENST00000401605 PIP4K2BP78356 416 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms