RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 KIAA1107Q9UPP5 1409 aa8.38□□□□□ -1.07
CASC3-202ENST00000394114 NUP155O75694 1391 aa8.38□□□□□ -1.07
CASC3-202ENST00000394114 PZPP20742 1482 aa8.37□□□□□ -1.07
CASC3-202ENST00000394114 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
CASC3-202ENST00000394114 ADGRL1O94910 1474 aa8.36□□□□□ -1.07
CASC3-202ENST00000394114 SMYD5Q6GMV2 418 aa8.36□□□□□ -1.07
CASC3-202ENST00000394114 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
CASC3-202ENST00000394114 SPAG9O60271 1321 aaKnown RBP8.36□□□□□ -1.07
CASC3-202ENST00000394114 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
CASC3-202ENST00000394114 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
CASC3-202ENST00000394114 ARAP3Q8WWN8 1544 aa8.35□□□□□ -1.07
CASC3-202ENST00000394114 MAST1Q9Y2H9 1570 aa8.35□□□□□ -1.07
CASC3-202ENST00000394114 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
CASC3-202ENST00000394114 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.07
CASC3-202ENST00000394114 ANKRD30BQ9BXX2 1392 aa8.34□□□□□ -1.07
CASC3-202ENST00000394114 ABCB7O75027 752 aa8.33□□□□□ -1.08
CASC3-202ENST00000394114 PLXNC1O60486 1568 aa8.33□□□□□ -1.08
CASC3-202ENST00000394114 FLIIQ13045 1269 aa8.33□□□□□ -1.08
CASC3-202ENST00000394114 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
CASC3-202ENST00000394114 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
CASC3-202ENST00000394114 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
CASC3-202ENST00000394114 ZFYVE16Q7Z3T8 1539 aa8.32□□□□□ -1.08
CASC3-202ENST00000394114 DUOX2Q9NRD8 1548 aa8.31□□□□□ -1.08
CASC3-202ENST00000394114 ACIN1Q9UKV3 1341 aaKnown RBP8.31□□□□□ -1.08
CASC3-202ENST00000394114 ATP7AQ04656 1500 aa8.31□□□□□ -1.08
CASC3-202ENST00000394114 TSPOAP1O95153 1857 aa8.31□□□□□ -1.08
CASC3-202ENST00000394114 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
CASC3-202ENST00000394114 FAM135AQ9P2D6 1515 aa8.31□□□□□ -1.08
CASC3-202ENST00000394114 RAPGEF3O95398 923 aa8.3□□□□□ -1.08
CASC3-202ENST00000394114 RPRD2Q5VT52 1461 aaKnown RBP8.3□□□□□ -1.08
CASC3-202ENST00000394114 PDE4DQ08499 809 aa8.3□□□□□ -1.08
CASC3-202ENST00000394114 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
CASC3-202ENST00000394114 INO80Q9ULG1 1556 aaPredicted RBP8.29□□□□□ -1.08
CASC3-202ENST00000394114 KDM5DQ9BY66 1539 aa8.29□□□□□ -1.08
CASC3-202ENST00000394114 TRIM66O15016 1216 aa8.29□□□□□ -1.08
CASC3-202ENST00000394114 UNC13BO14795 1591 aa8.29□□□□□ -1.08
CASC3-202ENST00000394114 KIF3BO15066 747 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 ZNF326Q5BKZ1 582 aaKnown RBP8.28□□□□□ -1.08
CASC3-202ENST00000394114 ERBINQ96RT1 1412 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 ZNF518AQ6AHZ1 1483 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 KIDINS220Q9ULH0 1771 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 RTEL1-TNFRSF6BF6WH68 1400 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 CFAP74Q9C0B2 1584 aa8.28□□□□□ -1.08
CASC3-202ENST00000394114 RGS22Q8NE09 1264 aa8.27□□□□□ -1.08
CASC3-202ENST00000394114 POGZQ7Z3K3 1410 aa8.27□□□□□ -1.09
CASC3-202ENST00000394114 A6NJR5 290 aa8.27□□□□□ -1.09
CASC3-202ENST00000394114 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
CASC3-202ENST00000394114 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
CASC3-202ENST00000394114 MAP3K4Q9Y6R4 1608 aa8.27□□□□□ -1.09
CASC3-202ENST00000394114 TEX14Q8IWB6 1497 aa8.27□□□□□ -1.09
CASC3-202ENST00000394114 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
CASC3-202ENST00000394114 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
CASC3-202ENST00000394114 RAD21O60216 631 aa8.26□□□□□ -1.09
CASC3-202ENST00000394114 FAM117AQ9C073 453 aa8.26□□□□□ -1.09
CASC3-202ENST00000394114 IQGAP3Q86VI3 1631 aa8.26□□□□□ -1.09
CASC3-202ENST00000394114 TRAK2O60296 914 aa8.26□□□□□ -1.09
CASC3-202ENST00000394114 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
CASC3-202ENST00000394114 NEO1Q92859 1461 aa8.25□□□□□ -1.09
CASC3-202ENST00000394114 IGSF3O75054 1194 aa8.25□□□□□ -1.09
CASC3-202ENST00000394114 RGL3Q3MIN7 710 aa8.25□□□□□ -1.09
CASC3-202ENST00000394114 ARIH1Q9Y4X5 557 aaPredicted RBP8.25□□□□□ -1.09
CASC3-202ENST00000394114 MAGI2Q86UL8 1455 aa8.24□□□□□ -1.09
CASC3-202ENST00000394114 DHX29Q7Z478 1369 aaKnown RBP8.24□□□□□ -1.09
CASC3-202ENST00000394114 KDM5CP41229 1560 aa8.24□□□□□ -1.09
CASC3-202ENST00000394114 HECW2Q9P2P5 1572 aa8.24□□□□□ -1.09
CASC3-202ENST00000394114 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
CASC3-202ENST00000394114 GLI2P10070 1586 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 CCDC144AA2RUR9 1427 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 GGT6Q6P531 493 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 CFAP65Q6ZU64 1925 aaKnown RBP8.23□□□□□ -1.09
CASC3-202ENST00000394114 ABCA6Q8N139 1617 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 A2MP01023 1474 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
CASC3-202ENST00000394114 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 PYGBP11216 843 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 DDX10Q13206 875 aaKnown RBP8.22□□□□□ -1.09
CASC3-202ENST00000394114 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 E9PCH4 1651 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 RICTORQ6R327 1708 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 KIF13AQ9H1H9 1805 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
CASC3-202ENST00000394114 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 DEPDC5O75140 1603 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
CASC3-202ENST00000394114 HSPA5P11021 654 aaKnown RBP8.22□□□□□ -1.09
CASC3-202ENST00000394114 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
CASC3-202ENST00000394114 KANK1Q14678 1352 aa8.21□□□□□ -1.09
CASC3-202ENST00000394114 YEATS2Q9ULM3 1422 aa8.21□□□□□ -1.09
CASC3-202ENST00000394114 FRMPD1Q5SYB0 1578 aa8.21□□□□□ -1.09
CASC3-202ENST00000394114 C1QBPQ07021 282 aaKnown RBP8.21□□□□□ -1.1
CASC3-202ENST00000394114 MROH1Q8NDA8 1641 aa8.21□□□□□ -1.1
CASC3-202ENST00000394114 CLUAP1Q96AJ1 413 aa8.21□□□□□ -1.1
CASC3-202ENST00000394114 CEP152O94986 1710 aa8.2□□□□□ -1.1
CASC3-202ENST00000394114 EIF2AK4Q9P2K8 1649 aaKnown RBP8.2□□□□□ -1.1
CASC3-202ENST00000394114 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
CASC3-202ENST00000394114 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
CASC3-202ENST00000394114 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
CASC3-202ENST00000394114 DIP2CQ9Y2E4 1556 aa8.19□□□□□ -1.1
CASC3-202ENST00000394114 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms