RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 SFXN1Q9H9B4 322 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 TBC1D17Q9HA65 648 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 TBC1D13Q9NVG8 400 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 KLK14Q9P0G3 267 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 KANSL3Q9P2N6 904 aa16.36■□□□□ 0.21
RPL13A-214ENST00000624069 WDR87Q6ZQQ6 2873 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 TISP43B9A030 160 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 OGTO15294 1046 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 INPPL1O15357 1258 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
RPL13A-214ENST00000624069 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.214e-18■□□□□ 8.1
RPL13A-214ENST00000624069 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 POMCP01189 267 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 DCNP07585 359 aaKnown RBP16.35■□□□□ 0.21
RPL13A-214ENST00000624069 ATXN1P54253 815 aaKnown RBP16.35■□□□□ 0.21
RPL13A-214ENST00000624069 KCNB1Q14721 858 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 KYAT1Q16773 422 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 C1orf210Q8IVY1 113 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 NELFCDQ8IXH7 590 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 ELOA2Q8IYF1 753 aaPredicted RBP16.35■□□□□ 0.21
RPL13A-214ENST00000624069 SLC44A3Q8N4M1 653 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 POMGNT1Q8WZA1 660 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 ACAP3Q96P50 834 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 FAM193BQ96PV7 902 aaPredicted RBP16.35■□□□□ 0.21
RPL13A-214ENST00000624069 HAPLN2Q9GZV7 340 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 IKZF4Q9H2S9 585 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 LMBRD1Q9NUN5 540 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 CA14Q9ULX7 337 aa16.35■□□□□ 0.21
RPL13A-214ENST00000624069 A0A0B4J269 797 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 GRIK3Q13003 919 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 STK4Q13043 487 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 BMT2Q1RMZ1 405 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 ARMCX5Q6P1M9 558 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 HS2ST1Q7LGA3 356 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 DDX53Q86TM3 631 aaKnown RBP16.34■□□□□ 0.21
RPL13A-214ENST00000624069 PPFIBP1Q86W92 1011 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 ZNF507Q8TCN5 953 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 AGO2Q9UKV8 859 aaKnown RBP16.34■□□□□ 0.21
RPL13A-214ENST00000624069 STYXL1Q9Y6J8 313 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 CITO14578 2027 aa16.34■□□□□ 0.21
RPL13A-214ENST00000624069 TDRD15B5MCY1 1934 aaKnown RBP16.33■□□□□ 0.21
RPL13A-214ENST00000624069 CARNS1A5YM72 827 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 KIF20AO95235 890 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 CLTAP09496 248 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 GARTP22102 1010 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 RFX1P22670 979 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 AFF1P51825 1210 aaKnown RBP16.33■□□□□ 0.2
RPL13A-214ENST00000624069 SEZ6Q53EL9 994 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 MAML2Q8IZL2 1156 aaPredicted RBP16.33■□□□□ 0.2
RPL13A-214ENST00000624069 BCL7CQ8WUZ0 217 aaPredicted RBP16.33■□□□□ 0.2
RPL13A-214ENST00000624069 IGSF21Q96ID5 467 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 GSDMAQ96QA5 445 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 SIT1Q9Y3P8 196 aa16.33■□□□□ 0.2
RPL13A-214ENST00000624069 FAM189A1O60320 539 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 CXCL8P10145 99 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 SRFP11831 508 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 GLULP15104 373 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 SDHBP21912 280 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 CLCN4P51793 760 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 PTPN14Q15678 1187 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 ST3GAL2Q16842 350 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
RPL13A-214ENST00000624069 ZFHX4Q86UP3 3567 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 GPR152Q8TDT2 470 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
RPL13A-214ENST00000624069 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
RPL13A-214ENST00000624069 PCDHA5Q9Y5H7 936 aa16.32■□□□□ 0.2
RPL13A-214ENST00000624069 PTGESO14684 152 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 KIAA0391O15091 583 aaKnown RBP16.31■□□□□ 0.2
RPL13A-214ENST00000624069 THP07101 528 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 GALTP07902 379 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 ADSSP30520 456 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 HOXD13P35453 343 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 TNFSF9P41273 254 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 PPP2R3AQ06190 1150 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 GLRA4Q5JXX5 417 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
RPL13A-214ENST00000624069 ZBTB41Q5SVQ8 909 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 KIAA0319Q5VV43 1072 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 GSTCDQ8NEC7 633 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
RPL13A-214ENST00000624069 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 CBWD1Q9BRT8 395 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 TMEM175Q9BSA9 504 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
RPL13A-214ENST00000624069 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms