RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 KRT76Q01546 638 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ABRQ12979 859 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CYB5D1Q6P9G0 228 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 TMEM154Q6P9G4 183 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 FEZF2Q8TBJ5 459 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 MRPL4Q9BYD3 311 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 FRMD8Q9BZ67 464 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 THAP1Q9NVV9 213 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 BFARQ9NZS9 450 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 KLC1Q07866 573 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 PDIA2Q13087 525 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 TMTC4Q5T4D3 741 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 NCAPG2Q86XI2 1143 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 JAMLQ86YT9 394 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 SNRNP27Q8WVK2 155 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 CPA5Q8WXQ8 436 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CEP19Q96LK0 163 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 FAM167BQ9BTA0 163 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 VPS11Q9H270 941 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 MTMR4Q9NYA4 1195 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 XPO7Q9UIA9 1087 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 GTPBP10A4D1E9 387 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 SDR42E2A6NKP2 422 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 GOLGA8SH3BPF8 625 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KITP10721 976 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 NFKBIAP25963 317 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 GADL1Q6ZQY3 521 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 YTHDF3Q7Z739 585 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 NDUFAF2Q8N183 169 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CALN1Q9BXU9 219 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 PKD2L2Q9NZM6 624 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KLHL8Q9P2G9 620 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 FBXO40Q9UH90 709 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CDYLQ9Y232 598 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ARHGEF5Q12774 1597 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 DENND3A2RUS2 1198 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 F5H6K3 240 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 GOLGA8MH3BSY2 632 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 EXTL3O43909 919 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 THRAP10827 490 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 RALAP11233 206 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CRKP46108 304 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 BCAR1P56945 870 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KLRC3Q07444 240 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 HP1BP3Q5SSJ5 553 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 SPOPLQ6IQ16 392 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 INTS5Q6P9B9 1019 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 PRUNE1Q86TP1 453 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ZNF677Q86XU0 584 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 TMEM139Q8IV31 216 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KSR1Q8IVT5 923 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CDKL3Q8IVW4 592 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 ASPSCR1Q9BZE9 553 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 JPH1Q9HDC5 661 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 ZC3H7BQ9UGR2 993 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 ITM2BQ9Y287 266 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 NVLO15381 856 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 H2AFYO75367 372 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 KRT16P08779 473 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 CD58P19256 250 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 FMO5P49326 533 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 COPAP53621 1224 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 EIF3EP60228 445 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 ZNF211Q13398 564 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 MAPRE2Q15555 327 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 NAIF1Q69YI7 327 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 SIX6OS1Q8N1H7 587 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 DAGLBQ8NCG7 672 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 SPATA33Q96N06 139 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KCNK16Q96T55 309 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 OSBPL1AQ9BXW6 950 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 YIPF3Q9GZM5 350 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ILKAPQ9H0C8 392 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 GDF3Q9NR23 364 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 MCM8Q9UJA3 840 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 POTEFA5A3E0 1075 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L15C9J2P7 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L13C9JLJ4 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L11C9JVI0 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L18D6R9N7 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L22D6RA61 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L17D6RBQ6 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L19D6RCP7 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L20D6RJB6 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 STRNO43815 780 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 POTEIP0CG38 1075 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 COPB2P35606 906 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 KCNJ1P48048 391 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L24Q0WX57 530 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 LVRNQ6Q4G3 990 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 USP17L6PQ6QN14 398 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 POTEEQ6S8J3 1075 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ERP27Q96DN0 273 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 PAGR1Q9BTK6 254 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ASCC2Q9H1I8 757 aaPredicted RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 CCDC134Q9H6E4 229 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 ALG6Q9Y672 507 aa3.21□□□□□ -1.9
LPP-221ENST00000618621 SETD1BQ9UPS6 1966 aaKnown RBP3.21□□□□□ -1.9
LPP-221ENST00000618621 YWHABP31946 246 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms