RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ZNF76P36508 570 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MAPK8P45983 427 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 DNM2P50570 870 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TRIM61Q5EBN2 209 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CREB3L3Q68CJ9 461 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CATIPQ7Z7H3 387 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 RALYLQ86SE5 291 aaKnown RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CMTR1Q8N1G2 835 aaKnown RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HASPINQ8TF76 798 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PIGKQ92643 395 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KCNB2Q92953 911 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 E2F7Q96AV8 911 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SH2D3AQ9BRG2 576 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LZTS2Q9BRK4 669 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZNF577Q9BSK1 485 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MTRRQ9UBK8 725 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MBD1Q9UIS9 605 aaPredicted RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 INVSQ9Y283 1065 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ADAMTS9Q9P2N4 1935 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 COL6A6A6NMZ7 2263 aa7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TNRC6BQ9UPQ9 1833 aaKnown RBP7.99□□□□□ -1.13
PTCHD3P1-201ENST00000612350 E7EWF7 191 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SLC27A2O14975 620 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MAFO75444 373 aaPredicted RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ABLIM3O94929 683 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KIF4AO95239 1232 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 LRG1P02750 347 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CYP3A4P08684 503 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CD59P13987 128 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ENGP17813 658 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 BCKDHBP21953 392 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FGFR3P22607 806 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IGFBP6P24592 240 aaPredicted RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 EPHA5P54756 1037 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KCNC4Q03721 635 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GRIK3Q13003 919 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 HNRNPDQ14103 355 aaKnown RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MTERF2Q49AM1 385 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMEM196Q5HYL7 178 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PCSK4Q6UW60 755 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 YAF2Q8IY57 180 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMTC2Q8N394 836 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 DAGLBQ8NCG7 672 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CTCFLQ8NI51 663 aaPredicted RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IGDCC4Q8TDY8 1250 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CHFRQ96EP1 664 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZFYVE19Q96K21 471 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMEM209Q96SK2 561 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 IRX2Q9BZI1 471 aaPredicted RBP7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PRORYQ9H606 182 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 RIC8AQ9NPQ8 531 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 DISC1Q9NRI5 854 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMEM74BQ9NUR3 256 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CDY1Q9Y6F8 540 aa7.98□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GOLGA4Q13439 2230 aaKnown RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ERICH2A1L162 156 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 WDR64B1ANS9 1081 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SEC24AO95486 1093 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 APBB3O95704 486 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 FTH1P19P0C7X4 201 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 AKAP5P24588 427 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PSMA5P28066 241 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 MCM5P33992 734 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GNAQP50148 359 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PRSS12P56730 875 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TNK2Q07912 1038 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CYP4F3Q08477 520 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ELAVL2Q12926 359 aaKnown RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TUSC3Q13454 348 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TEAD2Q15562 447 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TRIP6Q15654 476 aaKnown RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CYP4A22Q5TCH4 519 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 C11orf74Q86VG3 221 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TCEAL8Q8IYN2 117 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZNF654Q8IZM8 581 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PNPLA1Q8N8W4 532 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 ZNF461Q8TAF7 563 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 TMEM87BQ96K49 555 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NUSAP1Q9BXS6 441 aaKnown RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 GPR88Q9GZN0 384 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CSRNP2Q9H175 543 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 NXF3Q9H4D5 531 aaKnown RBP7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 KLK14Q9P0G3 267 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 COL4A3BPQ9Y5P4 624 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PTPRQQ9UMZ3 2332 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 PTPRDP23468 1912 aa7.97□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CFAP46Q8IYW2 2715 aa7.96□□□□□ -1.13
PTCHD3P1-201ENST00000612350 CASTOR2A6NHX0 329 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms