RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 LMAN2LQ9H0V9 348 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 CLEC1BQ9P126 229 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 PCDHGC5Q9Y5F6 944 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 MRPL42Q9Y6G3 142 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 CARNS1A5YM72 827 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 STX10O60499 249 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 GLP2RO95838 553 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 KRT13P13646 458 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 AKAP5P24588 427 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 GATMP50440 423 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 VAMP7P51809 220 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 OSTNP61366 133 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 TPM4P67936 248 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 ADAM15Q13444 863 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 SMAD4Q13485 552 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 SEZ6Q53EL9 994 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 TCP11X2Q5H9J9 407 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 CLLU1OSQ5K130 101 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 IER5LQ5T953 404 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 SLC35C1Q96A29 364 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 EEF2KMTQ96G04 330 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 PPP1R10Q96QC0 940 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 GAD1Q99259 594 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 CGRRF1Q99675 332 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 C11orf84Q9BUA3 381 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 IGFLR1Q9H665 355 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 SLC38A7Q9NVC3 462 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 PARP2Q9UGN5 583 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 LIMA1Q9UHB6 759 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
CHMP2A-207ENST00000600804 SMIM28A0A1B0GU29 152 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 MEIS3P2A8K0S8 358 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 GOLGA6L19H0YKK7 550 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 PTGESO14684 152 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 P4HA2O15460 535 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 ITGB1P05556 798 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 MLH1P40692 756 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 GRIK3Q13003 919 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 NAB2Q15742 525 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 GAS2L3Q86XJ1 694 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 ANKRD20A12PQ8NF67 263 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 PLEKHO2Q8TD55 490 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 CACTINQ8WUQ7 758 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 LPPQ93052 612 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 CASD1Q96PB1 797 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 MRPL9Q9BYD2 267 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 KCNH6Q9H252 994 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 UBQLN1Q9UMX0 589 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
CHMP2A-207ENST00000600804 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 N4BP1O75113 896 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 THP07101 528 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 LRPAP1P30533 357 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 WNT7BP56706 349 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 DSC1Q08554 894 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 MAN2A1Q16706 1144 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 C15orf39Q6ZRI6 1047 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 APTXQ7Z2E3 356 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 EFCAB13Q8IY85 973 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 CMTR2Q8IYT2 770 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 ABI1Q8IZP0 508 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 URGCPQ8TCY9 931 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 APOL6Q9BWW8 343 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 CD207Q9UJ71 328 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 FAM50BQ9Y247 325 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 COQ4Q9Y3A0 265 aa12.58□□□□□ -0.4
CHMP2A-207ENST00000600804 SCN1AP35498 2009 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 LOC730098B7Z3J9 87 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 NCK2O43639 380 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 FGFR1P11362 822 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 PAX3P23760 479 aa12.57□□□□□ -0.4
CHMP2A-207ENST00000600804 TCF15Q12870 199 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms