RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PNKPQ96T60 521 aa6.23□□□□□ -1.41
CDC27-216ENST00000574304 NUP88Q99567 741 aaPredicted RBP6.23□□□□□ -1.41
CDC27-216ENST00000574304 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
CDC27-216ENST00000574304 ALOXE3Q9BYJ1 711 aa6.23□□□□□ -1.41
CDC27-216ENST00000574304 WDR11Q9BZH6 1224 aa6.23□□□□□ -1.41
CDC27-216ENST00000574304 RNF181Q9P0P0 153 aa6.23□□□□□ -1.41
CDC27-216ENST00000574304 FOXN1O15353 648 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 B3GALT2O43825 422 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 CT47B1P0C2W7 299 aaPredicted RBP6.22□□□□□ -1.41
CDC27-216ENST00000574304 PF4V1P10720 104 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 FCER1AP12319 257 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 AKAP5P24588 427 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 SMARCA1P28370 1054 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 ZEB1P37275 1124 aaPredicted RBP6.22□□□□□ -1.41
CDC27-216ENST00000574304 CXADRP78310 365 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 SNAPC2Q13487 334 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 PIN1Q13526 163 aaPredicted RBP6.22□□□□□ -1.41
CDC27-216ENST00000574304 FLYWCH1Q4VC44 716 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 THEMIS2Q5TEJ8 643 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 SLC4A10Q6U841 1118 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 CHFRQ96EP1 664 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 GTPBP4Q9BZE4 634 aaKnown RBP6.22□□□□□ -1.41
CDC27-216ENST00000574304 IKZF4Q9H2S9 585 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 HSFX1Q9UBD0 423 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 KCNE5Q9UJ90 142 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 POLHQ9Y253 713 aa6.22□□□□□ -1.41
CDC27-216ENST00000574304 MTO1Q9Y2Z2 717 aaKnown RBP6.22□□□□□ -1.41
CDC27-216ENST00000574304 E2F8A0AVK6 867 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 GRID2IPA4D2P6 1211 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 NT5C1B-RDH14C9J2C7 533 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 F2RL2O00254 374 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 SLC16A6O15403 523 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 RAMP2O60895 175 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 ERN1O75460 977 aaKnown RBP6.21□□□□□ -1.42
CDC27-216ENST00000574304 FOSP01100 380 aaPredicted RBP6.21□□□□□ -1.42
CDC27-216ENST00000574304 FXR1P51114 621 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC27-216ENST00000574304 ZNF365Q70YC5 407 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 FAM43AQ8N2R8 423 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 ASB10Q8WXI3 467 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 RGMAQ96B86 450 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 BOD1Q96IK1 185 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 RHOBTB2Q9BYZ6 727 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 CYP4F11Q9HBI6 524 aa6.21□□□□□ -1.42
CDC27-216ENST00000574304 WDR33Q9C0J8 1336 aaKnown RBP6.21□□□□□ -1.42
CDC27-216ENST00000574304 A0A087X1B8 175 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 PIPSLA2A3N6 862 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 AKAP10O43572 662 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 ARIH2O95376 493 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 RAB27AP51159 221 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 EPHB1P54762 984 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 FSTL1Q12841 308 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 NOGQ13253 232 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 PGS1Q32NB8 556 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 ABHD17BQ5VST6 288 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 MVB12AQ96EY5 273 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 KLHL32Q96NJ5 620 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 MED15Q96RN5 788 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 TLR10Q9BXR5 811 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 GALNT9Q9HCQ5 603 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 TMEM74BQ9NUR3 256 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 SIDT1Q9NXL6 827 aaKnown RBP6.2□□□□□ -1.42
CDC27-216ENST00000574304 ZNF180Q9UJW8 692 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 SLC45A2Q9UMX9 530 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 PCDHA3Q9Y5H8 950 aa6.2□□□□□ -1.42
CDC27-216ENST00000574304 FTLP02792 175 aaPredicted RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 CYP2C19P33261 490 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 HK3P52790 923 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 TAP1Q03518 808 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 CYP2A13Q16696 494 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 Q6YL49 198 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 HEATR3Q7Z4Q2 680 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 JPH3Q8WXH2 748 aaPredicted RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 NACC2Q96BF6 587 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 RTFDC1Q9BY42 306 aaPredicted RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 GNL3LQ9NVN8 582 aaKnown RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 PNMA8BQ9ULN7 279 aaPredicted RBP6.19□□□□□ -1.42
CDC27-216ENST00000574304 CDYLQ9Y232 598 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 COL4A3Q01955 1670 aa6.19□□□□□ -1.42
CDC27-216ENST00000574304 GCP02774 474 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 ANXA1P04083 346 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 GNAI3P08754 354 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 FTH1P19P0C7X4 201 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
CDC27-216ENST00000574304 ITGAMP11215 1152 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 MAP2K6P52564 334 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 USP14P54578 494 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 GNAI1P63096 354 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 SCAPQ12770 1279 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 PLEKHG6Q3KR16 790 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 ODR4Q5SWX8 454 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 HECTD2Q5U5R9 776 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 PCSK4Q6UW60 755 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 GPR149Q86SP6 731 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 SLC17A8Q8NDX2 589 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 BEND2Q8NDZ0 799 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms