RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 Q8NA96 180 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 IFI44Q8TCB0 444 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 PTCD3Q96EY7 689 aaKnown RBP4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 FAXDC2Q96IV6 333 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 AIFM2Q9BRQ8 373 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 TLR10Q9BXR5 811 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 KCTD5Q9NXV2 234 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 TLK1Q9UKI8 766 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 HTRA2O43464 458 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 XPOTO43592 962 aaKnown RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 MYBL2P10244 700 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 CDKN1CP49918 316 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 C21orf58P58505 322 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 ZNF280AP59817 542 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 SIM1P81133 766 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 IL10RAQ13651 578 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 ATP2B3Q16720 1220 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 C3orf36Q3SXR2 165 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 ZNF362Q5T0B9 420 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 BOLLQ8N9W6 283 aaKnown RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 FAM98AQ8NCA5 519 aaKnown RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 NLGN4YQ8NFZ3 816 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 SSH3Q8TE77 659 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 HDAC10Q969S8 669 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 MED15Q96RN5 788 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 CCDC8Q9H0W5 538 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 RSAD1Q9HA92 442 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 VSX1Q9NZR4 365 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 FOXJ2Q9P0K8 574 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 LIMCH1Q9UPQ0 1083 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 IPPQ9Y573 584 aa4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 ARHGEF17Q96PE2 2063 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P33-201ENST00000563485 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 KLHL33A6NCF5 533 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 FZD9O00144 591 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 IGSF3O75054 1194 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 AGFG2O95081 481 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 EDNRBP24530 442 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 IL12RB1P42701 662 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 GUCY2FP51841 1108 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 SLC16A1P53985 500 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 MRPS35P82673 323 aaKnown RBP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 KIF23Q02241 960 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 ITKQ08881 620 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 MTMR1Q13613 665 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCBP2Q15366 365 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 SF3B3Q15393 1217 aaKnown RBP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 FLYWCH1Q4VC44 716 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 LNX2Q8N448 690 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 CAGE1Q8TC20 777 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 ACTRT2Q8TDY3 377 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 KAT5Q92993 513 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 TMEM125Q96AQ2 219 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 TEKT5Q96M29 485 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 DUSP26Q9BV47 211 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 KIAA1586Q9HCI6 787 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 LRIT1Q9P2V4 623 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 CDYLQ9Y232 598 aa4.47□□□□□ -1.69
HMGB1P33-201ENST00000563485 SBNO2Q9Y2G9 1366 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 CCDC154A6NI56 674 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 KATNA1O75449 491 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 CD1AP06126 327 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 ZNF37AP17032 561 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 FAM50AQ14320 339 aaKnown RBP4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 MTMR8Q96EF0 704 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 PDLIM2Q96JY6 352 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 MRGPRX4Q96LA9 322 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 KLHL32Q96NJ5 620 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 LRFN3Q9BTN0 628 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 SERPINB13Q9UIV8 391 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 SLC45A2Q9UMX9 530 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 DMTF1Q9Y222 760 aa4.46□□□□□ -1.7
HMGB1P33-201ENST00000563485 A0A1W2PS29 197 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 GABRDO14764 452 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 SGTAO43765 313 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 CD38P28907 300 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 RARRES1P49788 294 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 TLE1Q04724 770 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 SP5Q6BEB4 398 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 ZNF365Q70YC5 407 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 ARHGEF25Q86VW2 580 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 TMIEQ8NEW7 156 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 IL17RDQ8NFM7 739 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 COA7Q96BR5 231 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 CLPTM1LQ96KA5 538 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 DMRTA2Q96SC8 542 aa4.45□□□□□ -1.7
HMGB1P33-201ENST00000563485 JKAMPQ9P055 326 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms