RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CPPED1Q9BRF8 314 aaPredicted RBP4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 MRI1Q9BV20 369 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 CPEB1Q9BZB8 566 aaKnown RBP4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 C11orf54Q9H0W9 315 aaPredicted RBP4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 CHST12Q9NRB3 414 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 C1orf112Q9NSG2 853 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 OBP2AQ9NY56 170 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 STXBP5LQ9Y2K9 1186 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 RIPOR2Q9Y4F9 1068 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 PNPLA7Q6ZV29 1317 aa4.14□□□□□ -1.75
SHCBP1-202ENST00000563219 NT5C1B-RDH14C9J2C7 533 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 B3GALT2O43825 422 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 PLIN1O60240 522 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 CTNND1O60716 968 aaKnown RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 CAND2O75155 1236 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 TUSC2O75896 110 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 UBXN7O94888 489 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 FTLP02792 175 aaPredicted RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 ATP5JP18859 108 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 ZNF280AP59817 542 aaPredicted RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 COL10A1Q03692 680 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 SNAPC2Q13487 334 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 BIRC2Q13490 618 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 ATP2B3Q16720 1220 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 KHDC1Q4VXA5 237 aaKnown RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 PABPC1LQ4VXU2 614 aaKnown RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 GADL1Q6ZQY3 521 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 OVCH2Q7RTZ1 564 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 DNAJC10Q8IXB1 793 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 MB21D1Q8N884 522 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 ZBTB34Q8NCN2 500 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 IL17RDQ8NFM7 739 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 ZFP28Q8NHY6 868 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 CGRRF1Q99675 332 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 VRK1Q99986 396 aaPredicted RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 LRFN3Q9BTN0 628 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 NDC1Q9BTX1 674 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 PCGF6Q9BYE7 350 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 TMEM60Q9H2L4 133 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 PRDM11Q9NQV5 511 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 SIDT1Q9NXL6 827 aaKnown RBP4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 FZD1Q9UP38 647 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 HDAC5Q9UQL6 1122 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM50BQ9Y247 325 aa4.13□□□□□ -1.75
SHCBP1-202ENST00000563219 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 MTHFD1P11586 935 aaKnown RBP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 TYRP14679 529 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 NR4A1P22736 598 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 MGAT1P26572 445 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 HTR1BP28222 390 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 AGFG1P52594 562 aaKnown RBP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 NKX6-1P78426 367 aaPredicted RBP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 HLTFQ14527 1009 aaKnown RBP eCLIP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 ARHGAP29Q52LW3 1261 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 GORABQ5T7V8 394 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 CYB5RLQ6IPT4 315 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 EFCAB12Q6NXP0 572 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 HEATR3Q7Z4Q2 680 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 DGKHQ86XP1 1220 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 CAMKK1Q8N5S9 505 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 PPP1R35Q8TAP8 253 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 TFAP2CQ92754 450 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 CDK5RAP3Q96JB5 506 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 RPS6KC1Q96S38 1066 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 MYOCQ99972 504 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 WDCPQ9H6R7 721 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 DDX20Q9UHI6 824 aaKnown RBP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 RUVBL1Q9Y265 456 aaKnown RBP4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 PCDHA3Q9Y5H8 950 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 NR2E3Q9Y5X4 410 aa4.12□□□□□ -1.75
SHCBP1-202ENST00000563219 A0A088AWK7 358 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 LOC102724159A0A0B4J2E5 919 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM227AF5H4B4 570 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 GRM6O15303 877 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 PPFIA2O75334 1257 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 PPFIA4O75335 1185 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 SLC43A1O75387 559 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 POMCP01189 267 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 GCP02774 474 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 HRGP04196 525 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 ITGB1P05556 798 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 MYL1P05976 194 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 CD1AP06126 327 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 ALAS1P13196 640 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 HK1P19367 917 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 PRDX5P30044 214 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 CREMQ03060 361 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 GRM3Q14832 879 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 UBXN2BQ14CS0 331 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 PWP2Q15269 919 aaKnown RBP4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 ATXN7L2Q5T6C5 722 aaPredicted RBP4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 ZNF529Q6P280 563 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 SRGAP1Q7Z6B7 1085 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM90A1Q86YD7 464 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 SYT12Q8IV01 421 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 KIAA0319LQ8IZA0 1049 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 SYNE4Q8N205 404 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 FAM43AQ8N2R8 423 aa4.11□□□□□ -1.75
SHCBP1-202ENST00000563219 NLGN4YQ8NFZ3 816 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms