RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 NECAB2Q7Z6G3 386 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 DDX42Q86XP3 938 aaKnown RBP eCLIP4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 OR7D4Q8NG98 312 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 ZCRB1Q8TBF4 217 aaKnown RBP4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 AHCYL2Q96HN2 611 aaKnown RBP4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 FBXL20Q96IG2 436 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 RAX2Q96IS3 184 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 PNKPQ96T60 521 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
HDGFL3-202ENST00000562702 WASHC2AQ641Q2 1341 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 PNPLA7Q6ZV29 1317 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 GOLGA8AA7E2F4 631 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ADCY6O43306 1168 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 PRKD3O94806 890 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 PRR35P0CG20 571 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 CKBP12277 381 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ALAS1P13196 640 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 MTHFD2P13995 350 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ALOX15P16050 662 aaPredicted RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 TKTP29401 623 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ECHS1P30084 290 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 LGALS4P56470 323 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 TRIM25Q14258 630 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 SF3B3Q15393 1217 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ZNF626Q68DY1 528 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 KIAA0895LQ68EN5 471 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 ZNF517Q6ZMY9 492 aaPredicted RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 PEG10Q86TG7 708 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 TRMT2AQ8IZ69 625 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 REPS2Q8NFH8 660 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 DENND1AQ8TEH3 1009 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 COG1Q8WTW3 980 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 EAF2Q96CJ1 260 aaPredicted RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 FAM126AQ9BYI3 521 aaPredicted RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 PUS7LQ9H0K6 701 aaKnown RBP4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 BHMT2Q9H2M3 363 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 KCTD10Q9H3F6 313 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 C14orf119Q9NWQ9 140 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 SLC5A4Q9NY91 659 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 USP25Q9UHP3 1055 aa4.25□□□□□ -1.73
HDGFL3-202ENST00000562702 LINC01548A6NM66 108 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 GCOM1H8Y6P7 765 aaPredicted RBP4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 K7ESF4 209 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 TP73O15350 636 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 TEX33O43247 280 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 LPLP06858 475 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 SRGNP10124 158 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 ADSLP30566 484 aaPredicted RBP4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 CCKBRP32239 447 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 MAPK10P53779 464 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 SCAND1P57086 179 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 SSBP2P81877 361 aaPredicted RBP4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 MRPS9P82933 396 aaKnown RBP4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 AFMIDQ63HM1 303 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 AMIGO2Q86SJ2 522 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 LYSMD2Q8IV50 215 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 SLC41A1Q8IVJ1 513 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 SEMA6DQ8NFY4 1073 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 LMBR1Q8WVP7 490 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 AUTS2Q8WXX7 1259 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 RGMAQ96B86 450 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 ORAI2Q96SN7 254 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 WACQ9BTA9 647 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 VTA1Q9NP79 307 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 PHLDB1Q86UU1 1377 aa4.24□□□□□ -1.73
HDGFL3-202ENST00000562702 CDK11BP21127 795 aaKnown RBP4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 PLCD1P51178 756 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 POLGP54098 1239 aaPredicted RBP4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 ERVK-21P61565 698 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 GEN1Q17RS7 908 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 MORN5Q5VZ52 161 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 VWA1Q6PCB0 445 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 AMOTL1Q8IY63 956 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 GPR156Q8NFN8 814 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 TGFBRAP1Q8WUH2 860 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 NUP133Q8WUM0 1156 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 TFAP2BQ92481 460 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 HAPLN3Q96S86 360 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 SENP6Q9GZR1 1112 aaPredicted RBP4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 QRSL1Q9H0R6 528 aaKnown RBP4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 INTS13Q9NVM9 706 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 DPP7Q9UHL4 492 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 EDARQ9UNE0 448 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 COL4A3BPQ9Y5P4 624 aa4.23□□□□□ -1.73
HDGFL3-202ENST00000562702 ANKRD62A6NC57 917 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 ALG1L2C9J202 215 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 H3BNC9 293 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 CD1AP06126 327 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 IBSPP21815 317 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 CERS1P27544 350 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 SLC5A3P53794 718 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 AMPD3Q01432 767 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 KLF1Q13351 362 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 ETFDHQ16134 617 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 MUM1Q2TAK8 710 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 CMIPQ8IY22 773 aa4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 FAM177A1Q8N128 213 aaPredicted RBP4.22□□□□□ -1.73
HDGFL3-202ENST00000562702 FITM2Q8N6M3 262 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms