RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 GNGT1P63211 74 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 CENPCQ03188 943 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 DHX9Q08211 1270 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 CUL2Q13617 745 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 BYSLQ13895 437 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 TFDP1Q14186 410 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 MTERF2Q49AM1 385 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 TTMPQ5BVD1 217 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 LRRC38Q5VT99 294 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 DCAF12L1Q5VU92 463 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 TRMT10CQ7L0Y3 403 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 PHF13Q86YI8 300 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 JAMLQ86YT9 394 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 WDR49Q8IV35 697 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ZBTB8OSQ8IWT0 167 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 DHX37Q8IY37 1157 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 MCOLN2Q8IZK6 566 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 RIN2Q8WYP3 895 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 ALG3Q92685 438 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 CENPTQ96BT3 561 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PGM2Q96G03 612 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PAGR1Q9BTK6 254 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 MSTO1Q9BUK6 570 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 MRPL4Q9BYD3 311 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 ROPN1BQ9BZX4 212 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 EPN3Q9H201 632 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ROPN1Q9HAT0 212 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 RBAKQ9NYW8 714 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 WHRNQ9P202 907 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 NFS1Q9Y697 457 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PHIPQ8WWQ0 1821 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ADGRA2Q96PE1 1338 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 SMCHD1A6NHR9 2005 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 MYH11P35749 1972 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 TMEM150BA6NC51 233 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 CLDN3O15551 220 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 LGR5O75473 907 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 ECEL1O95672 775 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 GAS8O95995 478 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 KRT14P02533 472 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 RARGP13631 454 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 CD46P15529 392 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 GLRA2P23416 452 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 ATP5DP30049 168 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 NF2P35240 595 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 COILP38432 576 aaPredicted RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 MDH1P40925 334 aaKnown RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 GCGRP47871 477 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 PMS2P54278 862 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 COPS2P61201 443 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 ADCY2Q08462 1091 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 IFFO1Q0D2I5 559 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 CALCOCO2Q13137 446 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 SGSM1Q2NKQ1 1148 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 DENND2CQ68D51 928 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 CDCA2Q69YH5 1023 aaPredicted RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 CCDC137Q6PK04 289 aaKnown RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 FASTKD5Q7L8L6 764 aaKnown RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 TAS1R3Q7RTX0 852 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 PALB2Q86YC2 1186 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 ABRAQ8N0Z2 381 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 TTC39CQ8N584 583 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 PRELID2Q8N945 189 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 UBLCP1Q8WVY7 318 aaPredicted RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 ARL8AQ96BM9 186 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 WNK4Q96J92 1243 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 SPATC1LQ9H0A9 340 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 RASSF4Q9H2L5 321 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 GOLPH3Q9H4A6 298 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 MROH8Q9H579 483 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
SPG11-209ENST00000558253 ZDHHC18Q9NUE0 388 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 PARVAQ9NVD7 372 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 GGA3Q9NZ52 723 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 IP6K2Q9UHH9 426 aa8.87□□□□□ -0.99
SPG11-209ENST00000558253 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ADGRA3Q8IWK6 1321 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 A0A0G2JLL6 359 aaPredicted RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 GSTTP1A0A1W2PQM5 241 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ZSCAN5CA6NGD5 496 aaPredicted RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 LRRIQ4A6NIV6 560 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 PROSCO94903 275 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 IL18RAPO95256 599 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 CALB1P05937 261 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 PAEPP09466 180 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 CLTAP09496 248 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 PYGMP11217 842 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ATP4AP20648 1035 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ACO1P21399 889 aaKnown RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 KCNC4Q03721 635 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 MCL1Q07820 350 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ZNF844Q08AG5 666 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 CCNG2Q16589 344 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms