RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RGMAQ96B86 450 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 HOOK2Q96ED9 719 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 ADAM2Q99965 735 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 IKZF4Q9H2S9 585 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
SPG11-206ENST00000558093 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 KCNE5Q9UJ90 142 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 PCDHB1Q9Y5F3 818 aa4.4□□□□□ -1.71
SPG11-206ENST00000558093 FOXN1O15353 648 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 RHOBTB3O94955 611 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 FTLP02792 175 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 SBK3P0C264 359 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 PF4V1P10720 104 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 FCER1AP12319 257 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 PDCP20941 246 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 MALP21145 153 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 ZEB1P37275 1124 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 ZNF844Q08AG5 666 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 PREPLQ4J6C6 727 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 ZNF365Q70YC5 407 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 CATIPQ7Z7H3 387 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 COLGALT2Q8IYK4 626 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 FAM43AQ8N2R8 423 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 C3orf20Q8ND61 904 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 BEND2Q8NDZ0 799 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 ASB10Q8WXI3 467 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 MED15Q96RN5 788 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 SLITRK6Q9H5Y7 841 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 GALNT9Q9HCQ5 603 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 SLAMF7Q9NQ25 335 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 JKAMPQ9P055 326 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 FEZ2Q9UHY8 353 aaPredicted RBP4.39□□□□□ -1.71
SPG11-206ENST00000558093 POLHQ9Y253 713 aa4.39□□□□□ -1.71
SPG11-206ENST00000558093 LRRC14BA6NHZ5 514 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 ARIH2O95376 493 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 GCP02774 474 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 HKR1P10072 659 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 KRT4P19013 534 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 FDXRP22570 491 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 SLC6A4P31645 630 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 TAP1Q03518 808 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 SLFN5Q08AF3 891 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 PIN1Q13526 163 aaPredicted RBP4.38□□□□□ -1.71
SPG11-206ENST00000558093 TTF1Q15361 905 aaPredicted RBP4.38□□□□□ -1.71
SPG11-206ENST00000558093 PGS1Q32NB8 556 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 CRB2Q5IJ48 1285 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 ABHD17BQ5VST6 288 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 Q6YL49 198 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 USP45Q70EL2 814 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 SLC44A3Q8N4M1 653 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 TLR10Q9BXR5 811 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 IMPG2Q9BZV3 1241 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 CASS4Q9NQ75 786 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 KMT5AQ9NQR1 393 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 PACSIN3Q9UKS6 424 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 PCDHA3Q9Y5H8 950 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
SPG11-206ENST00000558093 TRGV11A0A075B6L2 103 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 LOC105371045A0A1W2PR82 267 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 PIPSLA2A3N6 862 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 CCDC78A2IDD5 438 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 GRID2IPA4D2P6 1211 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 TOR1BO14657 336 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 SLC16A6O15403 523 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 SLC43A1O75387 559 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 PSMC1P62191 440 aaKnown RBP4.37□□□□□ -1.71
SPG11-206ENST00000558093 PIGFQ07326 219 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 NOGQ13253 232 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 GEN1Q17RS7 908 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 CCDC93Q567U6 631 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 IFIT1BQ5T764 474 aaKnown RBP4.37□□□□□ -1.71
SPG11-206ENST00000558093 Q6ZPA2 131 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 SLC17A8Q8NDX2 589 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 TMEM125Q96AQ2 219 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 PTCD3Q96EY7 689 aaKnown RBP4.37□□□□□ -1.71
SPG11-206ENST00000558093 BOD1Q96IK1 185 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 KLHL32Q96NJ5 620 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 MAP3K14Q99558 947 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 NUP88Q99567 741 aaPredicted RBP4.37□□□□□ -1.71
SPG11-206ENST00000558093 GTPBP4Q9BZE4 634 aaKnown RBP4.37□□□□□ -1.71
SPG11-206ENST00000558093 BRD9Q9H8M2 597 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 CFAP97Q9P2B7 532 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 HSFX1Q9UBD0 423 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 ABCF2Q9UG63 623 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 ANKRD6Q9Y2G4 727 aa4.37□□□□□ -1.71
SPG11-206ENST00000558093 E2F8A0AVK6 867 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 ZNF785A8K8V0 405 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 F2RL2O00254 374 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 SUV39H1O43463 412 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 OFD1O75665 1012 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 ANXA1P04083 346 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 POU2F2P09086 479 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 FTH1P19P0C7X4 201 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 AKAP5P24588 427 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms