RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 AOPEPQ8N6M6 819 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 SLC25A43Q8WUT9 341 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-211ENST00000554437 RUNDC1Q96C34 613 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 SLC46A2Q9BY10 475 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 VPS11Q9H270 941 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 ARMT1Q9H993 441 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 SLAMF7Q9NQ25 335 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 KLHL11Q9NVR0 708 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 SIDT1Q9NXL6 827 aaKnown RBP6.45□□□□□ -1.38
SCFD1-211ENST00000554437 RNASET2O00584 256 aaKnown RBP6.44□□□□□ -1.38
SCFD1-211ENST00000554437 ERC2O15083 957 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 HTR1BP28222 390 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 PIK3CGP48736 1102 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 NOMO3P69849 1222 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 FAM189BP81408 668 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 TUBA3CQ13748 450 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 NOMO2Q5JPE7 1267 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 TUBA3EQ6PEY2 450 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF365Q70YC5 407 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 TTC8Q8TAM2 541 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 NUP133Q8WUM0 1156 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 MTFMTQ96DP5 389 aaKnown RBP6.44□□□□□ -1.38
SCFD1-211ENST00000554437 SLC35A4Q96G79 324 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 MARS2Q96GW9 593 aaKnown RBP6.44□□□□□ -1.38
SCFD1-211ENST00000554437 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 RNPEPQ9H4A4 650 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 BRD9Q9H8M2 597 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 AKIP1Q9NQ31 210 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 SLC2A4RGQ9NR83 387 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 REXO2Q9Y3B8 237 aaKnown RBP6.44□□□□□ -1.38
SCFD1-211ENST00000554437 PCDHA1Q9Y5I3 950 aa6.44□□□□□ -1.38
SCFD1-211ENST00000554437 A0A1B0GTW7 788 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 VSTM5A8MXK1 200 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 MATN3O15232 486 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 B3GALT2O43825 422 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 NCR1O76036 304 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 PEX11BO96011 259 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 NKX6-1P78426 367 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-211ENST00000554437 PLS1Q14651 629 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 TNPO1Q92973 898 aaKnown RBP6.43□□□□□ -1.38
SCFD1-211ENST00000554437 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF747Q9BV97 191 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 NRDE2Q9H7Z3 1164 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 C1orf112Q9NSG2 853 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 GABBR1Q9UBS5 961 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 FPGT-TNNI3KV9GXZ4 949 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 AATKQ6ZMQ8 1374 aa6.43□□□□□ -1.38
SCFD1-211ENST00000554437 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 NDUFA10O95299 355 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 HLA-DOAP06340 250 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 GJB1P08034 283 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 LAG3P18627 525 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 NR4A1P22736 598 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 PHKA1P46020 1223 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 PSMC1P62191 440 aaKnown RBP6.42□□□□□ -1.38
SCFD1-211ENST00000554437 FOXR2Q6PJQ5 311 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 DBX2Q6ZNG2 339 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 OVCH2Q7RTZ1 564 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 GGNQ86UU5 652 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 PPP1R3BQ86XI6 285 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 MAPKAPK5Q8IW41 473 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 SYNE4Q8N205 404 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 SLC17A8Q8NDX2 589 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 PLBD2Q8NHP8 589 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 BRIX1Q8TDN6 353 aaKnown RBP6.42□□□□□ -1.38
SCFD1-211ENST00000554437 PNKPQ96T60 521 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 LRFN3Q9BTN0 628 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 IMPG2Q9BZV3 1241 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 MRPL46Q9H2W6 279 aaKnown RBP6.42□□□□□ -1.38
SCFD1-211ENST00000554437 CFAP97Q9P2B7 532 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 USP25Q9UHP3 1055 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 MAP3K2Q9Y2U5 619 aa6.42□□□□□ -1.38
SCFD1-211ENST00000554437 TUSC2O75896 110 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 GPANK1O95872 356 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 AHSGP02765 367 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 ANXA1P04083 346 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 FCER1AP12319 257 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 TNFRSF1AP19438 455 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 FGFR4P22455 802 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 PTGS2P35354 604 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 HSD11B2P80365 405 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 MXRA7P84157 204 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 SLFN5Q08AF3 891 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 FGL2Q14314 439 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 TIGD2Q4W5G0 525 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 PDSS2Q86YH6 399 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 TMIEQ8NEW7 156 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 HAS1Q92839 578 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 KLHL32Q96NJ5 620 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 TLR10Q9BXR5 811 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
SCFD1-211ENST00000554437 STAP2Q9UGK3 403 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms