RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 AKAP10O43572 662 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 AGFG2O95081 481 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 CD1AP06126 327 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 PF4V1P10720 104 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 ZEB1P37275 1124 aaPredicted RBP7.86□□□□□ -1.15
YBX3-210ENST00000540975 FXR1P51114 621 aaKnown RBP eCLIP7.86□□□□□ -1.15
YBX3-210ENST00000540975 INHBCP55103 352 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 MXRA7P84157 204 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 SLFN5Q08AF3 891 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 TP53BP2Q13625 1128 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 FOXR2Q6PJQ5 311 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 TTPALQ9BTX7 342 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 ALOXE3Q9BYJ1 711 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 GTPBP4Q9BZE4 634 aaKnown RBP7.86□□□□□ -1.15
YBX3-210ENST00000540975 TMEM74BQ9NUR3 256 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 HSFX1Q9UBD0 423 aa7.86□□□□□ -1.15
YBX3-210ENST00000540975 PIPSLA2A3N6 862 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 NT5C1B-RDH14C9J2C7 533 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 DTNBO60941 627 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 CDKL5O76039 1030 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 SPDEFO95238 335 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 SMARCA1P28370 1054 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 CXADRP78310 365 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 THEMIS2Q5TEJ8 643 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 PACSIN1Q9BY11 444 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 RHOBTB2Q9BYZ6 727 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 IKZF4Q9H2S9 585 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 RNF181Q9P0P0 153 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 PCDHA3Q9Y5H8 950 aa7.85□□□□□ -1.15
YBX3-210ENST00000540975 E2F8A0AVK6 867 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 SLC16A6O15403 523 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 FOSP01100 380 aaPredicted RBP7.84□□□□□ -1.15
YBX3-210ENST00000540975 CT47B1P0C2W7 299 aaPredicted RBP7.84□□□□□ -1.15
YBX3-210ENST00000540975 FCER1AP12319 257 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 HK3P52790 923 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 TAP1Q03518 808 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 PIN1Q13526 163 aaPredicted RBP7.84□□□□□ -1.15
YBX3-210ENST00000540975 PGS1Q32NB8 556 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 MRGPRGQ86SM5 289 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 NACC2Q96BF6 587 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 CHFRQ96EP1 664 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 SIDT1Q9NXL6 827 aaKnown RBP7.84□□□□□ -1.15
YBX3-210ENST00000540975 KCNE5Q9UJ90 142 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 ZNF180Q9UJW8 692 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 SLC45A2Q9UMX9 530 aa7.84□□□□□ -1.15
YBX3-210ENST00000540975 B3GALT2O43825 422 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 ARIH2O95376 493 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 EGR2P11161 476 aaPredicted RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 EPHB1P54762 984 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 CYP2A13Q16696 494 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 SLC4A10Q6U841 1118 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 Q8NA96 180 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 JPH3Q8WXH2 748 aaPredicted RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 HPS3Q969F9 1004 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 FUBP1Q96AE4 644 aaKnown RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 RNF31Q96EP0 1072 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 MVB12AQ96EY5 273 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 MED15Q96RN5 788 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 TLR10Q9BXR5 811 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 CYP4F11Q9HBI6 524 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 GALNT9Q9HCQ5 603 aa7.83□□□□□ -1.16
YBX3-210ENST00000540975 VSX1Q9NZR4 365 aaPredicted RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 PNMA8BQ9ULN7 279 aaPredicted RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 MTO1Q9Y2Z2 717 aaKnown RBP7.83□□□□□ -1.16
YBX3-210ENST00000540975 RAMP2O60895 175 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 CYP2C19P33261 490 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 SCAPQ12770 1279 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 NOGQ13253 232 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 ATAT1Q5SQI0 421 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 ABHD17BQ5VST6 288 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.82□□□□□ -1.16
YBX3-210ENST00000540975 LCORLQ8N3X6 602 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 ASB10Q8WXI3 467 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 RGMAQ96B86 450 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 KLHL32Q96NJ5 620 aa7.82□□□□□ -1.16
YBX3-210ENST00000540975 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
YBX3-210ENST00000540975 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
YBX3-210ENST00000540975 A0A087X1B8 175 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 GRID2IPA4D2P6 1211 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 MYADML2A6NDP7 307 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 PRSS29PA6NIE9 313 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 ERN1O75460 977 aaKnown RBP7.81□□□□□ -1.16
YBX3-210ENST00000540975 GCP02774 474 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 ANXA1P04083 346 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 FTH1P19P0C7X4 201 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 PRDX5P30044 214 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 MAP2K6P52564 334 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 PLEKHG6Q3KR16 790 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 HEATR3Q7Z4Q2 680 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 GPR149Q86SP6 731 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 AOPEPQ8N6M6 819 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 SLC17A8Q8NDX2 589 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 CAMKK2Q96RR4 588 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 IMPG2Q9BZV3 1241 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
YBX3-210ENST00000540975 SYBUQ9NX95 663 aa7.81□□□□□ -1.16
YBX3-210ENST00000540975 ZFPL1O95159 310 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms