RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 IP6K2Q9UHH9 426 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 POLHQ9Y253 713 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 MARCH11A6NNE9 402 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 ALDH1L1O75891 902 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 AGFG2O95081 481 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 SPDEFO95238 335 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 GCP02774 474 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 ELANEP08246 267 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 CXADRP78310 365 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 BLOC1S1P78537 153 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 TLE1Q04724 770 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 ABHD17BQ5VST6 288 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 USP45Q70EL2 814 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 C3orf20Q8ND61 904 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 CAVIN3Q969G5 261 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 HOOK2Q96ED9 719 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 MED15Q96RN5 788 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 ADAM2Q99965 735 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 JKAMPQ9P055 326 aa6.64□□□□□ -1.35
PRKDC-205ENST00000535375 PIPSLA2A3N6 862 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 ARIH2O95376 493 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 SBK3P0C264 359 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 ITGAMP11215 1152 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 KRT4P19013 534 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 MALP21145 153 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 DSC2Q02487 901 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 B3GNTL1Q67FW5 361 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-205ENST00000535375 COLGALT2Q8IYK4 626 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 SLITRK6Q9H5Y7 841 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 ANKRD6Q9Y2G4 727 aa6.63□□□□□ -1.35
PRKDC-205ENST00000535375 SLC43A1O75387 559 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 GNAI3P08754 354 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 HKR1P10072 659 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 SLC6A4P31645 630 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 GNAI1P63096 354 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 PURAQ00577 322 aaKnown RBP6.62□□□□□ -1.35
PRKDC-205ENST00000535375 ZNF844Q08AG5 666 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-205ENST00000535375 CCDC157Q569K6 752 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 HECTD2Q5U5R9 776 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 SLC4A10Q6U841 1118 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-205ENST00000535375 Q6ZPA2 131 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 DMRTA2Q96SC8 542 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 TBCCD1Q9NVR7 557 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 PACSIN3Q9UKS6 424 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
PRKDC-205ENST00000535375 SLC16A6O15403 523 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 POU2F2P09086 479 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 PF4V1P10720 104 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 FCER1AP12319 257 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 AKAP5P24588 427 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 CYP2C19P33261 490 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 SLFN5Q08AF3 891 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 SNAPC2Q13487 334 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 Q6YL49 198 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 ZNF365Q70YC5 407 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 ASB10Q8WXI3 467 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 RGMAQ96B86 450 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 NUP88Q99567 741 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-205ENST00000535375 IMPG2Q9BZV3 1241 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 BRD9Q9H8M2 597 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 TCF7L1Q9HCS4 588 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 CASS4Q9NQ75 786 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 HSFX1Q9UBD0 423 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 CDYLQ9Y232 598 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 PCDHA3Q9Y5H8 950 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 COL4A3Q01955 1670 aa6.61□□□□□ -1.35
PRKDC-205ENST00000535375 E2F8A0AVK6 867 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 CCDC78A2IDD5 438 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 GRID2IPA4D2P6 1211 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 MYADML2A6NDP7 307 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 LRRC14BA6NHZ5 514 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 F2RL2O00254 374 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 FTLP02792 175 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-205ENST00000535375 ANXA1P04083 346 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 FDXRP22570 491 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 PIGFQ07326 219 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 PGS1Q32NB8 556 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 FLYWCH1Q4VC44 716 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 CATIPQ7Z7H3 387 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 PRR18Q8N4B5 295 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 BEND2Q8NDZ0 799 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 COQ10AQ96MF6 247 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 TOR3AQ9H497 397 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 SLAMF7Q9NQ25 335 aa6.6□□□□□ -1.35
PRKDC-205ENST00000535375 SIDT1Q9NXL6 827 aaKnown RBP6.6□□□□□ -1.35
PRKDC-205ENST00000535375 FTH1P19P0C7X4 201 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 EGR2P11161 476 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-205ENST00000535375 CYP2A13Q16696 494 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 CCDC93Q567U6 631 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 HEATR3Q7Z4Q2 680 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 CLNKQ7Z7G1 428 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 GPR149Q86SP6 731 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 STAG1Q8WVM7 1258 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms