RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 DGKHQ86XP1 1220 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CDKL3Q8IVW4 592 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SH2D3AQ9BRG2 576 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 OSBPL8Q9BZF1 889 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 TRIM9Q9C026 710 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 TASP1Q9H6P5 420 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PARVAQ9NVD7 372 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CAB39Q9Y376 341 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ABCB11O95342 1321 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ZBTB24O43167 697 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 AP5Z1O43299 807 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 UCHL3P15374 230 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 COMTP21964 271 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ADORA2BP29275 332 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CRKLP46109 303 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CACNA2D1P54289 1103 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ERVK-24P63145 666 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SURF1Q15526 300 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PLEKHA7Q6IQ23 1121 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 NLRP9Q7RTR0 991 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 E2F7Q96AV8 911 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SIK2Q9H0K1 926 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 FAM49AQ9H0Q0 323 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SEL1LQ9UBV2 794 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SEPT3Q9UH03 358 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 XDHP47989 1333 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ARHGEF40Q8TER5 1519 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 MAFGO15525 162 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 TPP2P29144 1249 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PDAP1Q13442 181 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 KCTD2Q14681 263 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 TMC5Q6UXY8 1006 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 MPP4Q96JB8 637 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 FAM111AQ96PZ2 611 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 COQ7Q99807 217 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 EML4Q9HC35 981 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 APOL1O14791 398 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 MOCS2O96007 188 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 LDHAP00338 332 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 MAP3K10Q02779 954 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 TNFAIP1Q13829 316 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 OASLQ15646 514 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 NAB2Q15742 525 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 SLC25A41Q8N5S1 370 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 PIK3C2BO00750 1634 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 MYO3BQ8WXR4 1341 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ERVV-1B6SEH8 477 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 KCNB1Q14721 858 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 GJB7Q6PEY0 223 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 CCDC60Q8IWA6 550 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 SYNE4Q8N205 404 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 TEX12Q9BXU0 123 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 RERGLQ9H628 205 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 NDFIP2Q9NV92 336 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 TMEM161AQ9NX61 479 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 TUBE1Q9UJT0 475 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 BLOC1S6Q9UL45 172 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 SSU72P8A0A1W2PR75 194 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ZBTB5O15062 677 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 RGS5O15539 181 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 STRNO43815 780 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 GRK2P25098 689 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 COPAP53621 1224 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 RUNX1T1Q06455 604 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 USP10Q14694 798 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 TAS2R42Q7RTR8 314 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FRMD5Q7Z6J6 570 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 ROPN1BQ9BZX4 212 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 ROPN1Q9HAT0 212 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 CDYLQ9Y232 598 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 GTF3C5Q9Y5Q8 519 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 RFX7Q2KHR2 1363 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FRMPD1Q5SYB0 1578 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 DFFAO00273 331 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FKBP9O95302 570 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 PRDX5P30044 214 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 GRIN1Q05586 938 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 LRRC74AQ0VAA2 488 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 MTMR1Q13613 665 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ZNF568Q3ZCX4 644 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FKBP9P1Q75LS8 142 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ARHGAP22Q7Z5H3 698 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 PATL1Q86TB9 770 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 MTDHQ86UE4 582 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 C11orf74Q86VG3 221 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 NDUFAF2Q8N183 169 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 DIS3LQ8TF46 1054 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 ANKS1AQ92625 1134 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 OMA1Q96E52 524 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 TMBIM4Q9HC24 238 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ORC4O43929 436 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 CLPTM1O96005 669 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms