RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 ACTL7AQ9Y615 435 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 SAMD9Q5K651 1589 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 RPGRIP1LQ68CZ1 1315 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 MAPKBP1O60336 1514 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ABCC2Q92887 1545 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 RHPN2P1A8MT19 583 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SASH1O94885 1247 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ALDH1A3P47895 512 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 TRAPPC10P48553 1259 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 KIAA2012Q0VF49 1180 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 MRPL49Q13405 166 aaKnown RBP5.65□□□□□ -1.5
CD44-220ENST00000525688 ATP2B3Q16720 1220 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ZNF568Q3ZCX4 644 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 MFSD14BQ5SR56 506 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SEM1Q6ZVN7 128 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 FRMD5Q7Z6J6 570 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 FAM124AQ86V42 546 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 PPP1R3BQ86XI6 285 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SH2D3CQ8N5H7 860 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ENAHQ8N8S7 591 aaPredicted RBP5.65□□□□□ -1.5
CD44-220ENST00000525688 IL17RDQ8NFM7 739 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 DEPTORQ8TB45 409 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 STON2Q8WXE9 905 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SECISBP2LQ93073 1101 aaKnown RBP5.65□□□□□ -1.5
CD44-220ENST00000525688 CEP95Q96GE4 821 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SUCLG2Q96I99 432 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 MSLNLQ96KJ4 702 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 SLC38A3Q99624 504 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 C11orf54Q9H0W9 315 aaPredicted RBP5.65□□□□□ -1.5
CD44-220ENST00000525688 KIAA1586Q9HCI6 787 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 IL23AQ9NPF7 189 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 PIH1D1Q9NWS0 290 aaKnown RBP5.65□□□□□ -1.5
CD44-220ENST00000525688 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 FNIP2Q9P278 1114 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 STAP2Q9UGK3 403 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 DMTF1Q9Y222 760 aa5.65□□□□□ -1.5
CD44-220ENST00000525688 ZMYM3Q14202 1370 aa5.65□□□□□ -1.51
CD44-220ENST00000525688 KDM5BQ9UGL1 1544 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ABHD14A-ACY1A0A1B0GW23 586 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 MATN2O00339 956 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PJA2O43164 708 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 SLC26A4O43511 780 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 SETSIPP0DME0 302 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 VDRP11473 427 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 NPR1P16066 1061 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 EN2P19622 333 aaPredicted RBP5.64□□□□□ -1.51
CD44-220ENST00000525688 PRIM2P49643 509 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ARFIP2P53365 341 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 NPEPPSP55786 919 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 FMO1Q01740 532 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PTH1RQ03431 593 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 BTKQ06187 659 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ZNF543Q08ER8 600 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 CNGA2Q16280 664 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PABPC1LQ4VXU2 614 aaKnown RBP5.64□□□□□ -1.51
CD44-220ENST00000525688 CCDC184Q52MB2 194 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 AFMIDQ63HM1 303 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 XRRA1Q6P2D8 792 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 OR2C3Q8N628 320 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ACRBPQ8NEB7 543 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 KBTBD7Q8WVZ9 684 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 SELENOOQ9BVL4 669 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 UNKQ9C0B0 810 aaKnown RBP5.64□□□□□ -1.51
CD44-220ENST00000525688 CNNM1Q9NRU3 951 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ZDHHC8Q9ULC8 765 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PCDHA6Q9UN73 950 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PCDHA1Q9Y5I3 950 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 USP19O94966 1318 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 PLB1Q6P1J6 1458 aa5.64□□□□□ -1.51
CD44-220ENST00000525688 ABCA8O94911 1581 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 NOBOXO60393 691 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 CD1AP06126 327 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 KITP10721 976 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
CD44-220ENST00000525688 SLC7A1P30825 629 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 PIK3CGP48736 1102 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 SLURP1P55000 103 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 KHDC1LQ5JSQ8 128 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 FAM83BQ5T0W9 1011 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 POU5F2Q8N7G0 328 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 FBXO18Q8NFZ0 1043 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 RIPOR3Q96MK2 946 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 DPH1Q9BZG8 443 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 RSPH9Q9H1X1 276 aaPredicted RBP5.63□□□□□ -1.51
CD44-220ENST00000525688 PPCSQ9HAB8 311 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 ZNF287Q9HBT7 754 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 STARD7Q9NQZ5 370 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 RLIMQ9NVW2 624 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 SLC23A1Q9UHI7 598 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 PADI4Q9UM07 663 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 ABCC10Q5T3U5 1492 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 EFCAB5A4FU69 1503 aa5.63□□□□□ -1.51
CD44-220ENST00000525688 UBE2QL1A1L167 161 aa5.62□□□□□ -1.51
CD44-220ENST00000525688 KLRG2A4D1S0 409 aaPredicted RBP5.62□□□□□ -1.51
CD44-220ENST00000525688 CXorf49A8MYA2 514 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms