RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 LOC100653049A0A140TA62 436 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 FCHO1O14526 889 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KRT34O76011 436 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 BAG3O95817 575 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 RALAP11233 206 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 BMP3P12645 472 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 ITIH2P19823 946 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 BGNP21810 368 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 NR1H3Q13133 447 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 STAT4Q14765 748 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 PSMD6Q15008 389 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 CYTH1Q15438 398 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 MAPK6Q16659 721 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 SEC14L1Q92503 715 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM84BQ96KN1 310 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM111AQ96PZ2 611 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KCTD10Q9H3F6 313 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 TAS2R1Q9NYW7 299 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 BLOC1S6Q9UL45 172 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 AK5Q9Y6K8 562 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 NALCNQ8IZF0 1738 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM237BA0A1B0GVD1 139 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KRT10P13645 584 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 ADARP55265 1226 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 GIT2Q14161 759 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 EFTUD2Q15029 972 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■■□□ 16.9
TRAPPC12-223ENST00000497597 RIPOR1Q6ZS17 1223 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 PALM2Q8IXS6 379 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 TRAIPQ9BWF2 469 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 STARD13Q9Y3M8 1113 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 NID2Q14112 1375 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 A0A0A6YYK5 440 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ABLIM1O14639 778 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ZBTB39O15060 712 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 RNASEH1O60930 286 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TMCC1O94876 653 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 PRKCIP41743 596 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 CCR3P51677 355 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 PPATQ06203 517 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 AP1B1Q10567 949 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SLC44A4Q53GD3 710 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 RBM44Q6ZP01 1051 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 CYFIP1Q7L576 1253 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ARID3BQ8IVW6 561 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ZNF384Q8TF68 577 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ECSITQ9BQ95 431 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SLC13A1Q9BZW2 595 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 PAIP2BQ9ULR5 123 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TISP43B9A030 160 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SPECC1L-ADORA2AF8WAN1 911 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SGK1O00141 431 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 MT-ND3P03897 115 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ITGA2BP08514 1039 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 ANPEPP15144 967 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SSTR1P30872 391 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 DRG2P55039 364 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TMPRSS15P98073 1019 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 RASA2Q15283 850 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 C10orf82Q8WW14 230 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TIPINQ9BVW5 301 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 APEX2Q9UBZ4 518 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 PPM1HQ9ULR3 514 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 I3L4J1 428 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 CCNG1P51959 295 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 SCUBE1Q8IWY4 988 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 GALNT4Q8N4A0 578 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 NAT14Q8WUY8 206 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM192AQ9GZU8 254 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 MANSC1Q9H8J5 431 aa11.22□□□□□ -0.61
TRAPPC12-223ENST00000497597 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 ADCY3O60266 1144 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 PCP11498 1178 aaKnown RBP11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 NELFEP18615 380 aaKnown RBP11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 ARSEP51690 589 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 OCRLQ01968 901 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 MPP3Q13368 585 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 EDRF1Q3B7T1 1238 aa11.21□□□□□ -0.61
TRAPPC12-223ENST00000497597 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms