RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 TAX1BP1Q86VP1 789 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 SKAP1Q86WV1 359 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 OR2C3Q8N628 320 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 BRI3BPQ8WY22 251 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 DDX17Q92841 729 aaKnown RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 ZC3H10Q96K80 434 aaKnown RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 CPPED1Q9BRF8 314 aaPredicted RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 TRIM54Q9BYV2 358 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 AFF4Q9UHB7 1163 aaKnown RBP6.65□□□□□ -1.34
SSR3-208ENST00000496050 MED16Q9Y2X0 877 aa6.65□□□□□ -1.34
SSR3-208ENST00000496050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.342e-7■□□□□ 10.4
SSR3-208ENST00000496050 PNPLA7Q6ZV29 1317 aa6.65□□□□□ -1.35
SSR3-208ENST00000496050 POM121BA6NF01 834 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 BTN3A1O00481 513 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 LAMTOR5O43504 91 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 STC2O76061 302 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 GNAI2P04899 355 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 TNFSF4P23510 183 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 PHKA1P46020 1223 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 RAP2BP61225 183 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 ZNF124Q15973 351 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 FAM214AQ32MH5 1076 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 ATXN7L2Q5T6C5 722 aaPredicted RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 IZUMO3Q5VZ72 239 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 XRRA1Q6P2D8 792 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 MYLK4Q86YV6 388 aaPredicted RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 FITM2Q8N6M3 262 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 CELF5Q8N6W0 485 aaKnown RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 GIMAP8Q8ND71 665 aaPredicted RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 TFAP2CQ92754 450 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 NMD3Q96D46 503 aaKnown RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 MSLNLQ96KJ4 702 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 MPHOSPH9Q99550 1183 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 P2RX7Q99572 595 aaKnown RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 PLA2G12BQ9BX93 195 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 SPON1Q9HCB6 807 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 TRMT13Q9NUP7 481 aaKnown RBP6.64□□□□□ -1.35
SSR3-208ENST00000496050 LRCH1Q9Y2L9 728 aa6.64□□□□□ -1.35
SSR3-208ENST00000496050 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 HAUS5O94927 633 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 RARBP10826 455 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 STK3Q13188 491 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 DAG1Q14118 895 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 DHX8Q14562 1220 aaKnown RBP6.63□□□□□ -1.35
SSR3-208ENST00000496050 KRT72Q14CN4 511 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 GRAMD1BQ3KR37 738 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 SLC44A4Q53GD3 710 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 METTL24Q5JXM2 366 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 DGKKQ5KSL6 1271 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 FAM83BQ5T0W9 1011 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 UTP14CQ5TAP6 766 aaKnown RBP6.63□□□□□ -1.35
SSR3-208ENST00000496050 ZNF365Q70YC5 407 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 GPRIN1Q7Z2K8 1008 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 SESTD1Q86VW0 696 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 XYLT1Q86Y38 959 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 VPS37AQ8NEZ2 397 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 TMEM176AQ96HP8 235 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 SIK2Q9H0K1 926 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 PLA2G3Q9NZ20 509 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 POGKQ9P215 609 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 PAXBP1Q9Y5B6 917 aa6.63□□□□□ -1.35
SSR3-208ENST00000496050 ZNF536O15090 1300 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 F5H423 210 aaPredicted RBP6.62□□□□□ -1.35
SSR3-208ENST00000496050 IPO13O94829 963 aaKnown RBP6.62□□□□□ -1.35
SSR3-208ENST00000496050 PARP1P09874 1014 aaKnown RBP6.62□□□□□ -1.35
SSR3-208ENST00000496050 MGAT1P26572 445 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 SLC13A2Q13183 592 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 DRICH1Q6PGQ1 229 aaPredicted RBP6.62□□□□□ -1.35
SSR3-208ENST00000496050 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
SSR3-208ENST00000496050 ST8SIA2Q92186 375 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 COLEC11Q9BWP8 271 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 DPH1Q9BZG8 443 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 VPS11Q9H270 941 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 CERS4Q9HA82 394 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 SERHLQ9NQF3 203 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
SSR3-208ENST00000496050 NPEPPSL1A6NEC2 478 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 MYO1CO00159 1063 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 TCEA3O75764 348 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 FGF18O76093 207 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 ABHD16AO95870 558 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 SLC6A4P31645 630 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 TXKP42681 527 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 PSMC1P62191 440 aaKnown RBP6.61□□□□□ -1.35
SSR3-208ENST00000496050 RAB32Q13637 225 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 C3orf38Q5JPI3 329 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 LMBRD2Q68DH5 695 aaPredicted RBP6.61□□□□□ -1.35
SSR3-208ENST00000496050 USP37Q86T82 979 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 GSPT2Q8IYD1 628 aaKnown RBP6.61□□□□□ -1.35
SSR3-208ENST00000496050 SDR16C5Q8N3Y7 309 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 ATP11CQ8NB49 1132 aa6.61□□□□□ -1.35
SSR3-208ENST00000496050 PCSK9Q8NBP7 692 aaKnown RBP6.61□□□□□ -1.35
SSR3-208ENST00000496050 SCAMP4Q969E2 229 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms