RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ZC3H10Q96K80 434 aaKnown RBP10.85□□□□□ -0.67
SND1-213ENST00000486037 CSRNP2Q9H175 543 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 TENM4Q6N022 2769 aa10.85□□□□□ -0.67
SND1-213ENST00000486037 ASXL3Q9C0F0 2248 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 SPAARA0A1B0GVQ0 90 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 HEPACAM2A8MVW5 462 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 B4GALT5O43286 388 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 GAS7O60861 476 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 PRB1P04280 392 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 PTPN2P17706 415 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 CSRP1P21291 193 aaKnown RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 CTHP32929 405 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 MCM4P33991 863 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 JAK3P52333 1124 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 CREB5Q02930 508 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 NAB2Q15742 525 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 PFKFB3Q16875 520 aaPredicted RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 FOXD4L6Q3SYB3 417 aaPredicted RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 FAM173BQ6P4H8 233 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 B3GNT9Q6UX72 402 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 FOXD4L3Q6VB84 417 aaPredicted RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 MIER3Q7Z3K6 550 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 MFSD6LQ8IWD5 586 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 RNF149Q8NC42 400 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 WASF1Q92558 559 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 SMARCD2Q92925 531 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 ZFYVE19Q96K21 471 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 LRRC3BQ96PB8 259 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 GBP4Q96PP9 640 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 TEKT3Q9BXF9 490 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 WRAP73Q9P2S5 460 aaPredicted RBP10.84□□□□□ -0.67
SND1-213ENST00000486037 MTRRQ9UBK8 725 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 PCNX2A6NKB5 2137 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 ABCA7Q8IZY2 2146 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 NUP205Q92621 2012 aa10.84□□□□□ -0.67
SND1-213ENST00000486037 KIF26AQ9ULI4 1882 aaPredicted RBP10.83□□□□□ -0.68
SND1-213ENST00000486037 ARHGEF37A1IGU5 675 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
SND1-213ENST00000486037 PTGESO14684 152 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 PSMD10O75832 226 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 SEC24AO95486 1093 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 NPTXRO95502 500 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 CAVIN2O95810 425 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 ARF4P18085 180 aaPredicted RBP10.83□□□□□ -0.68
SND1-213ENST00000486037 FGFR3P22607 806 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 SFNP31947 248 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 KPNA1P52294 538 aaPredicted RBP10.83□□□□□ -0.68
SND1-213ENST00000486037 TUSC3Q13454 348 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 UAP1L1Q3KQV9 507 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 DGKKQ5KSL6 1271 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 LRCH2Q5VUJ6 765 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 CD300LGQ6UXG3 332 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 ZSCAN18Q8TBC5 510 aaPredicted RBP10.83□□□□□ -0.68
SND1-213ENST00000486037 DEPDC1BQ8WUY9 529 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 RIT2Q99578 217 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 GTSE1Q9NYZ3 720 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 PARP2Q9UGN5 583 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 KCNJ14Q9UNX9 436 aa10.83□□□□□ -0.68
SND1-213ENST00000486037 I3L4J1 428 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 ERLIN2O94905 339 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
SND1-213ENST00000486037 FAM193AP78312 1265 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 TRIM29Q14134 588 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 TEAD2Q15562 447 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 MCTP1Q6DN14 999 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 NOTUMQ6P988 496 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 CHCHD4Q8N4Q1 142 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 CSGALNACT1Q8TDX6 532 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 HNRNPLLQ8WVV9 542 aaKnown RBP10.82□□□□□ -0.68
SND1-213ENST00000486037 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
SND1-213ENST00000486037 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
SND1-213ENST00000486037 HHIPQ96QV1 700 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 DHX33Q9H6R0 707 aaKnown RBP10.82□□□□□ -0.68
SND1-213ENST00000486037 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 TMEM9BQ9NQ34 198 aa10.82□□□□□ -0.68
SND1-213ENST00000486037 APC2O95996 2303 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 CCDC163A0A0D9SF12 145 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 EML1O00423 815 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 LRG1P02750 347 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 MLLT6P55198 1093 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 PTENP60484 403 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 ROR1Q01973 937 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 DNM1Q05193 864 aaKnown RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 TNK2Q07912 1038 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 SCAPQ12770 1279 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 NPY5RQ15761 445 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 STXBP5Q5T5C0 1151 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 PDZD4Q76G19 769 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 CHFRQ96EP1 664 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 CCDC51Q96ER9 411 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms