RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SATL1Q86VE3 508 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 ALG3Q92685 438 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 ARHGEF26Q96DR7 871 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PFDN4Q9NQP4 134 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PODXLO00592 558 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 MAPK13O15264 365 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 ASMTLO95671 621 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 GGPS1O95749 300 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 CDR2Q01850 454 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 KIF22Q14807 665 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 IZUMO2Q6UXV1 221 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 ST13P4Q8IZP2 240 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PPP1R14BQ96C90 147 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 UIMC1Q96RL1 719 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC28BQ9BUN5 200 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 RUSC1Q9BVN2 902 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 TLE6Q9H808 572 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 GGA1Q9UJY5 639 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PCDHA3Q9Y5H8 950 aa12.27□□□□□ -0.45
SEC61A1-205ENST00000483956 PFASO15067 1338 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 UBE4BO95155 1302 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 TRAFD1O14545 582 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 BRAFP15056 766 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 NAT1P18440 290 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 CTNNA2P26232 953 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 PRR16Q569H4 304 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 KSR1Q8IVT5 923 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 NME8Q8N427 588 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 ABHD8Q96I13 439 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 DDX18Q9NVP1 670 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 APEX2Q9UBZ4 518 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 MTRF1LQ9UGC7 380 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 VAV3Q9UKW4 847 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 COG5Q9UP83 839 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 EFR3BQ9Y2G0 817 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 TMEM247A6NEH6 219 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 CLIC2O15247 247 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 OPHN1O60890 802 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 ALAS1P13196 640 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 ABCB4P21439 1286 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 KCNA1Q09470 495 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 PICALMQ13492 652 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 THAP2Q9H0W7 228 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 BHMT2Q9H2M3 363 aa12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 STX18Q9P2W9 335 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-205ENST00000483956 CIITAP33076 1130 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 SREBF1P36956 1147 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 TMEM53Q6P2H8 277 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC25Q86WR0 208 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 DCAF4Q8WV16 495 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 UMODL1Q5DID0 1318 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 CDK4P11802 303 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 RPL21P46778 160 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 DNAJC3Q13217 504 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 TMEM259Q4ZIN3 620 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 UBL4BQ8N7F7 174 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 STMN2Q93045 179 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 C18orf8Q96DM3 657 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 RUNDC3BQ96NL0 473 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 IL1RAPL1Q9NZN1 696 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 R3HDM2Q9Y2K5 976 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 EP400Q96L91 3159 aa12.25□□□□□ -0.45
SEC61A1-205ENST00000483956 ATP9BO43861 1147 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 BCRP11274 1271 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 RARGP13631 454 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 KRT13P13646 458 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ERFP50548 548 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 EMP3P54852 163 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CYP1B1Q16678 543 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 RINT1Q6NUQ1 792 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 RFX8Q6ZV50 586 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 SYNCQ9H7C4 482 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 SLCO1B3Q9NPD5 702 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms