RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 XDHP47989 1333 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 NT5C1B-RDH14C9J2C7 533 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 FAM227AF5H4B4 570 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 PRC1O43663 620 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 FTH1P19P0C7X4 201 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 TBX4P57082 545 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 NKX6-1P78426 367 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-211ENST00000476215 PURAQ00577 322 aaKnown RBP6.27□□□□□ -1.41
PTCD3-211ENST00000476215 PLS1Q14651 629 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 NPNTQ6UXI9 565 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 IL17RDQ8NFM7 739 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 NLGN4YQ8NFZ3 816 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-211ENST00000476215 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 GSTO2Q9H4Y5 243 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
PTCD3-211ENST00000476215 STAP2Q9UGK3 403 aa6.27□□□□□ -1.41
PTCD3-211ENST00000476215 A0A088AWK7 358 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 DRGXA6NNA5 263 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 A6NNZ2 444 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 HAUS5O94927 633 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 ITGB1P05556 798 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 SLC6A2P23975 617 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 PRDX5P30044 214 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 MCM7P33993 719 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 GNALP38405 381 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 CHN2P52757 468 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 RAB1AP62820 205 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 SLC25A3Q00325 362 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 CCDC149Q6ZUS6 474 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 MED25Q71SY5 747 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 SYT12Q8IV01 421 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 ZFPM1Q8IX07 1006 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 C1orf43Q9BWL3 253 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 SLAMF7Q9NQ25 335 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 PCDHA1Q9Y5I3 950 aa6.26□□□□□ -1.41
PTCD3-211ENST00000476215 CDHR4A6H8M9 788 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 GNAI3P08754 354 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 SLC6A4P31645 630 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 PIK3CGP48736 1102 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 AGFG1P52594 562 aaKnown RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 GNAI1P63096 354 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 NHLH2Q02577 135 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 FGL2Q14314 439 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 CCDC93Q567U6 631 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 CHST15Q7LFX5 561 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 SRGAP1Q7Z6B7 1085 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 PPP1R3BQ86XI6 285 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 ZNF483Q8TF39 744 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 TNPO1Q92973 898 aaKnown RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 NT5C1BQ96P26 610 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 MRIQ9BWK5 157 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 MRPL46Q9H2W6 279 aaKnown RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 SIDT1Q9NXL6 827 aaKnown RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 EIF2B4Q9UI10 523 aaKnown RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 CPA4Q9UI42 421 aa6.25□□□□□ -1.41
PTCD3-211ENST00000476215 ING1Q9UK53 422 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-211ENST00000476215 CAPN8A6NHC0 703 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 LEFTY2O00292 366 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 TPP1O14773 563 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 SLC43A1O75387 559 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 APOBEC3AP31941 199 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-211ENST00000476215 HMGA2P52926 109 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 USP14P54578 494 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
PTCD3-211ENST00000476215 RHOUQ7L0Q8 258 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 FAM90A1Q86YD7 464 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 CCAR1Q8IX12 1150 aaKnown RBP6.24□□□□□ -1.41
PTCD3-211ENST00000476215 KIAA0319LQ8IZA0 1049 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 FITM2Q8N6M3 262 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 FAM156AQ8NDB6 213 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 TBC1D15Q8TC07 691 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 BRIX1Q8TDN6 353 aaKnown RBP6.24□□□□□ -1.41
PTCD3-211ENST00000476215 BRD9Q9H8M2 597 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 SARS2Q9NP81 518 aaKnown RBP6.24□□□□□ -1.41
PTCD3-211ENST00000476215 JKAMPQ9P055 326 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 PCDHA6Q9UN73 950 aa6.24□□□□□ -1.41
PTCD3-211ENST00000476215 CAND2O75155 1236 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 AHSGP02765 367 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 KRT18P05783 430 aaKnown RBP6.23□□□□□ -1.41
PTCD3-211ENST00000476215 PHKA1P46020 1223 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
PTCD3-211ENST00000476215 GPSM2P81274 684 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 GALEQ14376 348 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 HLTFQ14527 1009 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTCD3-211ENST00000476215 KIAA0753Q2KHM9 967 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 KHDC1LQ5JSQ8 128 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 ZNF365Q70YC5 407 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 COL23A1Q86Y22 540 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-211ENST00000476215 AOPEPQ8N6M6 819 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 REXO4Q9GZR2 422 aaKnown RBP6.23□□□□□ -1.41
PTCD3-211ENST00000476215 CNNM1Q9NRU3 951 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 GPRC5BQ9NZH0 403 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 L1RE1Q9UN81 338 aa6.23□□□□□ -1.41
PTCD3-211ENST00000476215 SORCS3Q9UPU3 1222 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms