RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ANKLE2Q86XL3 938 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 IQCF2Q8IXL9 164 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 FAM186BQ8IYM0 893 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZBED8Q8IZ13 594 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MYOCDQ8IZQ8 938 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NUP93Q8N1F7 819 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 OGFOD1Q8N543 542 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 C10orf82Q8WW14 230 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PYDC1Q8WXC3 89 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MTBPQ96DY7 904 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 THAP11Q96EK4 314 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GCNAQ96QF7 691 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TMEM109Q9BVC6 243 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NACAP1Q9BZK3 213 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SMYD3Q9H7B4 428 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 LIN28AQ9H9Z2 209 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 SAR1AQ9NR31 198 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 KBTBD4Q9NVX7 518 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SAP30BPQ9UHR5 308 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZBTB21Q9ULJ3 1066 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PPM1HQ9ULR3 514 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZNF330Q9Y3S2 320 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 NUB1Q9Y5A7 615 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 COL4A3BPQ9Y5P4 624 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 FADS3Q9Y5Q0 445 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 HEMK1Q9Y5R4 338 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 TNKSO95271 1327 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 DCCP43146 1447 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 A8MXQ7 604 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ANKRD63C9JTQ0 380 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MATN2O00339 956 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRAFD1O14545 582 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 VILLO15195 856 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 EDF1O60869 148 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PHF2O75151 1096 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NOL4O94818 638 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 OCM2P0CE71 109 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 OCMP0CE72 109 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 UQCRBP14927 111 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CHRNA3P32297 505 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GTF2H1P32780 548 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ADD2P35612 726 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TUFMP49411 452 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 PCYT1AP49585 367 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GALCP54803 685 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 AQP4P55087 323 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PLCB3Q01970 1234 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZBTB17Q13105 803 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MTMR2Q13614 643 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MOGSQ13724 837 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 NCOA4Q13772 614 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PKN1Q16512 942 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 RABL6Q3YEC7 729 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 C10orf76Q5T2E6 689 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SEL1L2Q5TEA6 688 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ARL6IP4Q66PJ3 421 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 CENPPQ6IPU0 288 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GET4Q7L5D6 327 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 OTOAQ7RTW8 1153 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 MIER3Q7Z3K6 550 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 PRUNE1Q86TP1 453 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ICA1LQ8NDH6 482 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 ZFP28Q8NHY6 868 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CCDC127Q96BQ5 260 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 CCDC124Q96CT7 223 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 CALML4Q96GE6 196 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GPR101Q96P66 508 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 POP1Q99575 1024 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 PRPF18Q99633 342 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 HEPHQ9BQS7 1158 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TUBB6Q9BUF5 446 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SPZ1Q9BXG8 430 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 DDX43Q9NXZ2 648 aaKnown RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 MTUS1Q9ULD2 1270 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 SPO11Q9Y5K1 396 aa4.47□□□□□ -1.69
VPS50-210ENST00000471188 GPC6Q9Y625 555 aaPredicted RBP4.47□□□□□ -1.69
VPS50-210ENST00000471188 QSER1Q2KHR3 1735 aa4.46□□□□□ -1.69
VPS50-210ENST00000471188 MYOCOSA0A1B0GUC4 107 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 EXOC1LA0A1B0GW35 172 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TSPY2A6NKD2 308 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 BIRC5O15392 142 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 RNMTO43148 476 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PRPF3O43395 683 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PRKAB2O43741 272 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SERPINB7O75635 380 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 S100BP04271 92 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PCCAP05165 728 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 TSPY3P0CV98 308 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TSPY8P0CW00 308 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 RXRBP28702 533 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 CRABP2P29373 138 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TECP42680 631 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 STT3AP46977 705 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 EPHB1P54762 984 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 FKBP3Q00688 224 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 TSPY1Q01534 308 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 LMNB2Q03252 620 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms