RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TBC1D15Q8TC07 691 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 NUP133Q8WUM0 1156 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 CEP89Q96ST8 783 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 ALOXE3Q9BYJ1 711 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 IKZF4Q9H2S9 585 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 DDX56Q9NY93 547 aaKnown RBP4.88□□□□□ -1.63
VPS50-209ENST00000467326 CALCOCO1Q9P1Z2 691 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 NOX1Q9Y5S8 564 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 AATKQ6ZMQ8 1374 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 FOXN1O15353 648 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 MARCH6O60337 910 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 ERN1O75460 977 aaKnown RBP4.87□□□□□ -1.63
VPS50-209ENST00000467326 FOSP01100 380 aaPredicted RBP4.87□□□□□ -1.63
VPS50-209ENST00000467326 PDGFRBP09619 1106 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 SBK3P0C264 359 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 FCER1AP12319 257 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 ZEB1P37275 1124 aaPredicted RBP4.87□□□□□ -1.63
VPS50-209ENST00000467326 SLFN5Q08AF3 891 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 FOXR2Q6PJQ5 311 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 SLC4A10Q6U841 1118 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 PCSK4Q6UW60 755 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 ZNF365Q70YC5 407 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 TMEM132CQ8N3T6 1108 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 LCORLQ8N3X6 602 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 ASB10Q8WXI3 467 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 HOOK2Q96ED9 719 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 HSPBAP1Q96EW2 488 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 WDR11Q9BZH6 1224 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 CYP4F11Q9HBI6 524 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 MAN1C1Q9NR34 630 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 AASDHPPTQ9NRN7 309 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 CDYLQ9Y232 598 aa4.87□□□□□ -1.63
VPS50-209ENST00000467326 MTO1Q9Y2Z2 717 aaKnown RBP4.87□□□□□ -1.63
VPS50-209ENST00000467326 CCDC78A2IDD5 438 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 ALDH1L1O75891 902 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 AGFG2O95081 481 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 HECTD2Q5U5R9 776 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 CATIPQ7Z7H3 387 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 IL17RDQ8NFM7 739 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 STAG1Q8WVM7 1258 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 RGMAQ96B86 450 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 MARS2Q96GW9 593 aaKnown RBP4.86□□□□□ -1.63
VPS50-209ENST00000467326 PNKPQ96T60 521 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 VRK1Q99986 396 aaPredicted RBP4.86□□□□□ -1.63
VPS50-209ENST00000467326 TLR10Q9BXR5 811 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 MYH16Q9H6N6 1097 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 GALNT9Q9HCQ5 603 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 DMRT1Q9Y5R6 373 aa4.86□□□□□ -1.63
VPS50-209ENST00000467326 LRRC14BA6NHZ5 514 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 CT47B1P0C2W7 299 aaPredicted RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 ITGAMP11215 1152 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 MALP21145 153 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 FDXRP22570 491 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 AVPR1BP47901 424 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 FXR1P51114 621 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS50-209ENST00000467326 USP14P54578 494 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 DSC2Q02487 901 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 TTF1Q15361 905 aaPredicted RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 FLYWCH1Q4VC44 716 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 KHDC1Q4VXA5 237 aaKnown RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 UTP14CQ5TAP6 766 aaKnown RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 THEMIS2Q5TEJ8 643 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 ABHD17BQ5VST6 288 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 USP45Q70EL2 814 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 SUPT20HQ8NEM7 779 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 MED15Q96RN5 788 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 DMRTA2Q96SC8 542 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 NUP88Q99567 741 aaPredicted RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 HSFX1Q9UBD0 423 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 TESQ9UGI8 421 aaKnown RBP4.85□□□□□ -1.63
VPS50-209ENST00000467326 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
VPS50-209ENST00000467326 PIPSLA2A3N6 862 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 SLC16A6O15403 523 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 SLC43A1O75387 559 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 ABLIM3O94929 683 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 RHOBTB3O94955 611 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 GCP02774 474 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.63
VPS50-209ENST00000467326 GNAI3P08754 354 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 HKR1P10072 659 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 PF4V1P10720 104 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 VCAM1P19320 739 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 PDCP20941 246 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 TGM1P22735 817 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 VAV2P52735 878 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 GNAI1P63096 354 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 TAP1Q03518 808 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 NOGQ13253 232 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 GEN1Q17RS7 908 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 GORABQ5T7V8 394 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 FAM43AQ8N2R8 423 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 AOPEPQ8N6M6 819 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 BOD1Q96IK1 185 aa4.84□□□□□ -1.63
VPS50-209ENST00000467326 KLHL32Q96NJ5 620 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms