RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 YWHAHQ04917 246 aaPredicted RBP7.4□□□□□ -1.22
CDK12-202ENST00000447079 NR1I3Q14994 352 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 MAPRE2Q15555 327 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 NIPA1Q7RTP0 329 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 RASSF3Q86WH2 238 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 PCSK9Q8NBP7 692 aaKnown RBP7.4□□□□□ -1.22
CDK12-202ENST00000447079 SCFD1Q8WVM8 642 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 RGL1Q9NZL6 768 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 VPS9D1Q9Y2B5 631 aa7.4□□□□□ -1.22
CDK12-202ENST00000447079 TRIM66O15016 1216 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 C6orf222P0C671 652 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 ESRRAP11474 423 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 OCRLQ01968 901 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 NAB2Q15742 525 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MYLK4Q86YV6 388 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 RIBC1Q8N443 379 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MTBPQ96DY7 904 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 TMEM39BQ9GZU3 492 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 KDM4CQ9H3R0 1056 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 TBK1Q9UHD2 729 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 TBX20Q9UMR3 447 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 NEMP1O14524 444 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MYO1DO94832 1006 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 KRT16P08779 473 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MYBPC2Q14324 1141 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 WDR72Q3MJ13 1102 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 TRMT10CQ7L0Y3 403 aaKnown RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 NLRP14Q86W24 1093 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MCUQ8NE86 351 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 DHX35Q9H5Z1 703 aaKnown RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 GPBP1L1Q9HC44 474 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 TMX2Q9Y320 296 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 PXDNQ92626 1479 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 KRT14P02533 472 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 SLC4A1P02730 911 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 R3HDM1Q15032 1099 aaKnown RBP7.4□□□□□ -1.23
CDK12-202ENST00000447079 EFCAB12Q6NXP0 572 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.23
CDK12-202ENST00000447079 PHF2O75151 1096 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ADORA2BP29275 332 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 NME3Q13232 169 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 MAML1Q92585 1016 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 DACT3Q96B18 629 aaPredicted RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 KIFC3Q9BVG8 833 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 RSAD1Q9HA92 442 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 DUOX1Q9NRD9 1551 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 UCHL3P15374 230 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 CALML6Q8TD86 181 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ASIC4Q96FT7 647 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 PITPNM3Q9BZ71 974 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SULT1E1P49888 294 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 TRIM59Q8IWR1 403 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 TAB3Q8N5C8 712 aaPredicted RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 RNPC3Q96LT9 517 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 CCDC138Q96M89 665 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 MRIQ9BWK5 157 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 KDM1AO60341 852 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SERPINB9P50453 376 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SLC7A5Q01650 507 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ATPAF2Q8N5M1 289 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 UHMK1Q8TAS1 419 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 ERGIC2Q96RQ1 377 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 AGAP1Q9UPQ3 857 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 CXCL11O14625 94 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 FGFR2P21802 821 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 NEK2P51955 445 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 CORO7P57737 925 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 TROAPQ12815 778 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 PDK1Q15118 436 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 IMPG1Q17R60 797 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 KIF19Q2TAC6 998 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 GRAMD1BQ3KR37 738 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDK12-202ENST00000447079 DBR1Q9UK59 544 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 ZBBXA8MT70 800 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 PSTPIP1O43586 416 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 CYP2C9P11712 490 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 CASP2P42575 452 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 EIF3EP60228 445 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 CENPCQ03188 943 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 TRIP13Q15645 432 aaPredicted RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 NUGGCQ68CJ6 796 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 LINC00523Q86TU6 105 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 GLT1D1Q96MS3 346 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 MYMKA6NI61 221 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 C3orf70A6NLC5 250 aaPredicted RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 PP2D1A8MPX8 630 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SUPT20HL2P0C7V6 817 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ARHGAP15Q53QZ3 475 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 SLITRK1Q96PX8 696 aa7.39□□□□□ -1.23
CDK12-202ENST00000447079 ELAC2Q9BQ52 826 aaKnown RBP7.39□□□□□ -1.23
CDK12-202ENST00000447079 FAM167BQ9BTA0 163 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms