RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 RHOT2Q8IXI1 618 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 OSBPL7Q9BZF2 842 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 IMPG2Q9BZV3 1241 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 ACTR5Q9H9F9 607 aaPredicted RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 HAUS2Q9NVX0 235 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 ZNFX1Q9P2E3 1918 aaKnown RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 GOLGA6L10A6NI86 522 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 SRRM3A6NNA2 597 aaPredicted RBP15.11■□□□□ 0.01
LIMD1-202ENST00000440097 ZBTB42B2RXF5 422 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 GCNT1Q02742 428 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 TFDP1Q14186 410 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 QPCTQ16769 361 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 NT5DC3Q86UY8 548 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 FAM228AQ86W67 206 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 THNSL1Q8IYQ7 743 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 FUKQ8N0W3 1084 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 OR2W6PQ8NHA6 318 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 PBKQ96KB5 322 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 NCANO14594 1321 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 GMNCA6NCL1 334 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 RAD51CO43502 376 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 MSCO60682 206 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 CSDE1O75534 798 aaKnown RBP15.11■□□□□ 0.01
LIMD1-202ENST00000440097 CHRNB2P17787 502 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 HSPA9P38646 679 aaKnown RBP15.11■□□□□ 0.01
LIMD1-202ENST00000440097 FMO1Q01740 532 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 ZPBP2Q6X784 338 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIMD1-202ENST00000440097 ENOSF1Q7L5Y1 443 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 AFG1LQ8WV93 481 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 MIEF2Q96C03 454 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 SCLT1Q96NL6 688 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 COG5Q9UP83 839 aa15.11■□□□□ 0.01
LIMD1-202ENST00000440097 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 SCN4AP35499 1836 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 GH1P01241 217 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 C4BPAP04003 597 aaKnown RBP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 GCLCP48506 637 aaPredicted RBP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 CDR2Q01850 454 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 MESDQ14696 234 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ZNF653Q96CK0 615 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 C2orf40Q9H1Z8 148 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 PPME1Q9Y570 386 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 PGRMC1O00264 195 aaKnown RBP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ZC3H11AO75152 810 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 LGALS2P05162 132 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 MYZAPP0CAP1 466 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 INSRRP14616 1297 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 TMOD1P28289 359 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 TNNC1P63316 161 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ARHGAP1Q07960 439 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ZNF792Q3KQV3 632 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ZNF568Q3ZCX4 644 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ANKRD20A8PQ5CZ79 823 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 CGRRF1Q99675 332 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 AKT3Q9Y243 479 aa15.1■□□□□ 0.01
LIMD1-202ENST00000440097 DIS3Q9Y2L1 958 aaKnown RBP15.1■□□□□ 0.01
LIMD1-202ENST00000440097 B4GALT5O43286 388 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 STRNO43815 780 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 HSD17B3P37058 310 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 TFAMQ00059 246 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 NCOA4Q13772 614 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 HLTFQ14527 1009 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 TMEM270Q6UE05 265 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 C15orf39Q6ZRI6 1047 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 GPR142Q7Z601 462 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 MORC4Q8TE76 937 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 ACO2Q99798 780 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 TPX2Q9ULW0 747 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 KRIT1O00522 736 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 ATP2C2O75185 946 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 VNN1O95497 513 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 SSTR3P32745 418 aaPredicted RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 SGSM3Q96HU1 749 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 PARK7Q99497 189 aaKnown RBP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 MTMR12Q9C0I1 747 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 VTA1Q9NP79 307 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 BCCIPQ9P287 314 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIMD1-202ENST00000440097 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 ADGRA2Q96PE1 1338 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 LRRC37A2A6NM11 1700 aa15.09■□□□□ 0.01
LIMD1-202ENST00000440097 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0.01
LIMD1-202ENST00000440097 GZMAP12544 262 aa15.08■□□□□ 0.01
LIMD1-202ENST00000440097 CLDN10P78369 228 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms