RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 EXTL3O43909 919 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 MTA2O94776 668 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 PAEPP09466 180 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 CYB5D1Q6P9G0 228 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 CCDC89Q8N998 374 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 DCLK3Q9C098 648 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 SAYSD1Q9NPB0 183 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 FBXO40Q9UH90 709 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 GOLGA8SH3BPF8 625 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 PARP9Q8IXQ6 854 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 DDX1Q92499 740 aaKnown RBP17.79■□□□□ 0.44
TTC3-209ENST00000438055 ZNF516Q92618 1163 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 HERPUD2Q9BSE4 406 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 WHRNQ9P202 907 aa17.79■□□□□ 0.44
TTC3-209ENST00000438055 TAS2R40P59535 323 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 NOP14P78316 857 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 P3H1Q32P28 736 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 ZBTB41Q5SVQ8 909 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 TDRD10Q5VZ19 366 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 GPRASP2Q96D09 838 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 LRRD1A4D1F6 860 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 H0YCG3 227 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 GOLGA8MH3BSY2 632 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 TTC4O95801 387 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 GARTP22102 1010 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 SLC1A1P43005 524 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 CUL2Q13617 745 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 SUGP1Q8IWZ8 645 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 ATXN2Q99700 1313 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 PROSCO94903 275 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 MARK3P27448 753 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 CNGA2Q16280 664 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 XKR3Q5GH77 459 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 ATXN2LQ8WWM7 1075 aaKnown RBP17.78■□□□□ 0.44
TTC3-209ENST00000438055 RBM15Q96T37 977 aaKnown RBP eCLIP17.78■□□□□ 0.442e-9■■■■■ 31.4
TTC3-209ENST00000438055 PAGR1Q9BTK6 254 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 SYNCQ9H7C4 482 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 ZNF302Q9NR11 478 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 GGA2Q9UJY4 613 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
TTC3-209ENST00000438055 EXOC1LA0A1B0GW35 172 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 RASA4BC9J798 803 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 CHUKO15111 745 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 RASA4O43374 803 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 SPAG7O75391 227 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 SRGAP2CP0DJJ0 459 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 MYBL1P10243 752 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 GTF2H1P32780 548 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 TRPC3Q13507 836 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 CYP1B1Q16678 543 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 TRPM8Q7Z2W7 1104 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 GIMAP7Q8NHV1 300 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 C17orf75Q9HAS0 396 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 SUN1O94901 812 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 TFAMQ00059 246 aaKnown RBP17.77■□□□□ 0.44
TTC3-209ENST00000438055 DNAJC24Q6P3W2 148 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 MICALL2Q8IY33 904 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 FUKQ8N0W3 1084 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 CDHR1Q96JP9 859 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 ROPN1BQ9BZX4 212 aaPredicted RBP17.77■□□□□ 0.44
TTC3-209ENST00000438055 ROPN1Q9HAT0 212 aaPredicted RBP17.77■□□□□ 0.44
TTC3-209ENST00000438055 KIAA1586Q9HCI6 787 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 QSER1Q2KHR3 1735 aa17.77■□□□□ 0.44
TTC3-209ENST00000438055 KRT19P08727 400 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 DSG3P32926 999 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 NCOA4Q13772 614 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 SEPT7Q16181 437 aaKnown RBP17.77■□□□□ 0.43
TTC3-209ENST00000438055 CENPTQ96BT3 561 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 ADAM7Q9H2U9 754 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 ABCF3Q9NUQ8 709 aa17.77■□□□□ 0.43
TTC3-209ENST00000438055 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 SGSM3Q96HU1 749 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 ZNF317Q96PQ6 595 aaPredicted RBP17.76■□□□□ 0.43
TTC3-209ENST00000438055 TGS1Q96RS0 853 aaKnown RBP17.76■□□□□ 0.43
TTC3-209ENST00000438055 AS3MTQ9HBK9 375 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 NINJ2Q9NZG7 142 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 NXF1Q9UBU9 619 aaKnown RBP17.76■□□□□ 0.43
TTC3-209ENST00000438055 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 SGK1O00141 431 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 PEX10O60683 326 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 GH1P01241 217 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 ZSCAN5DPP0CG00 497 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 WNT7BP56706 349 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 BACE1P56817 501 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 GPS1Q13098 491 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 ZNF280CQ8ND82 737 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 OR5B17Q8NGF7 314 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 MCEEQ96PE7 176 aa17.76■□□□□ 0.43
TTC3-209ENST00000438055 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms