RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C15orf52Q6ZUT6 534 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 LHFPL2Q6ZUX7 228 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF771Q7L3S4 317 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GPR155Q7Z3F1 870 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SPATA21Q7Z572 469 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZSWIM2Q8NEG5 633 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DENND6BQ8NEG7 585 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 FBXO27Q8NI29 283 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TRPC4APQ8TEL6 797 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DIS3LQ8TF46 1054 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TCP11Q8WWU5 503 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DNAAF4Q8WXU2 420 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 FRAT1Q92837 279 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ANAPC16Q96DE5 110 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF845Q96IR2 970 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 VPS39Q96JC1 886 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 MAML3Q96JK9 1138 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ARL5BQ96KC2 179 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 C16orf45Q96MC5 204 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CATSPER2Q96P56 530 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 FAM193BQ96PV7 902 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GAL3ST1Q99999 423 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TCF25Q9BQ70 676 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 THUMPD2Q9BTF0 503 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC106Q9BWC9 280 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TXLNGYQ9BZA5 131 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 NACAP1Q9BZK3 213 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 FOXP3Q9BZS1 431 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM5Q9C035 493 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GLT8D2Q9H1C3 349 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TRPV6Q9H1D0 765 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SPON1Q9HCB6 807 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 COPRSQ9NQ92 184 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ANLNQ9NQW6 1124 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 HOMER3Q9NSC5 361 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PTBP2Q9UKA9 531 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PTPN22Q9Y2R2 807 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF711Q9Y462 761 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZBED9Q6R2W3 1325 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 NSD2O96028 1365 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 PDLIM1O00151 329 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 EBAG9O00559 213 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 IKBKBO14920 756 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 NVLO15381 856 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 RIPK2O43353 540 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TXNL1O43396 289 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 OPA1O60313 960 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 GRIN3BO60391 1043 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MGEA5O60502 916 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 PEX10O60683 326 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 FBXO21O94952 628 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 NPPAP01160 153 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 PF4P02776 101 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ESR1P03372 595 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SRGAP2BP0DMP2 458 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TROVE2P10155 538 aaKnown RBP eCLIP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CYP2A6P11509 494 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 JAK1P23458 1154 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 HOXA11P31270 313 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 RFC4P35249 363 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 HAAOP46952 286 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SLC26A5P58743 744 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 BEX3Q00994 111 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 DMPKQ09013 629 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CAMK2GQ13555 558 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 NFE2L1Q14494 772 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MXD4Q14582 209 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 LRRFIP1Q32MZ4 808 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MAJINQ3KP22 176 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 FUT11Q495W5 492 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CFAP221Q4G0U5 840 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC38Q502W7 563 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF385BQ569K4 471 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 WDR73Q6P4I2 378 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 KLC3Q6P597 504 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CHST15Q7LFX5 561 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 NOSTRINQ8IVI9 506 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MCATQ8IVS2 390 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 NKAIN4Q8IVV8 208 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SLFN12Q8IYM2 578 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SCYL3Q8IZE3 742 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CRACR2BQ8N4Y2 399 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MYCT1Q8N699 235 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SLC4A11Q8NBS3 891 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ARRDC4Q8NCT1 418 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ZMIZ2Q8NF64 920 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 DEPTORQ8TB45 409 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF483Q8TF39 744 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ZFAND2BQ8WV99 257 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ATP2A3Q93084 1043 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ARL8AQ96BM9 186 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MIEF2Q96C03 454 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 DHX58Q96C10 678 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 PSKH2Q96QS6 385 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SLF1Q9BQI6 1058 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TARS2Q9BW92 718 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SPZ1Q9BXG8 430 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms