RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TMEM161AQ9NX61 479 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 KLK14Q9P0G3 267 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 PCDHB7Q9Y5E2 793 aa14.71□□□□□ -0.06
VAPB-202ENST00000395802 MEFVO15553 781 aaPredicted RBP14.7□□□□□ -0.06
VAPB-202ENST00000395802 OFD1O75665 1012 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 SERPING1P05155 500 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 EN2P19622 333 aaPredicted RBP14.7□□□□□ -0.06
VAPB-202ENST00000395802 PAX3P23760 479 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 ANXA13P27216 316 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 SOX5P35711 763 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 MLH1P40692 756 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 MYL6P60660 151 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 CUL2Q13617 745 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 DRAP1Q14919 205 aaPredicted RBP14.7□□□□□ -0.06
VAPB-202ENST00000395802 ASIC2Q16515 512 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 CNKSR3Q6P9H4 555 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 ZNF598Q86UK7 904 aaKnown RBP14.7□□□□□ -0.06
VAPB-202ENST00000395802 URGCPQ8TCY9 931 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 SCLYQ96I15 445 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 CCDC42Q96M95 316 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 ZMAT2Q96NC0 199 aaKnown RBP14.7□□□□□ -0.06
VAPB-202ENST00000395802 GAD1Q99259 594 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 DNAI2Q9GZS0 605 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 NIF3L1Q9GZT8 377 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 KCND1Q9NSA2 647 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 AGAP1Q9UPQ3 857 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 UMODL1Q5DID0 1318 aa14.7□□□□□ -0.06
VAPB-202ENST00000395802 ANK1P16157 1881 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 TANC1Q9C0D5 1861 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 ENPP3O14638 875 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 INPPL1O15357 1258 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 CCP110O43303 1012 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 POLR2BP30876 1174 aaKnown RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 RPL9P32969 192 aaKnown RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 CYLC1P35663 651 aaPredicted RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 BPIFB4P59827 614 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 GRIK3Q13003 919 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 ARHGAP44Q17R89 818 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 GLRA4Q5JXX5 417 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 AGMOQ6ZNB7 445 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 ABI1Q8IZP0 508 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 PI4K2AQ9BTU6 479 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 SSU72P8A0A1W2PR75 194 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 LRPAP1P30533 357 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 TNNC1P63316 161 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 APBA1Q02410 837 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 KLHL30Q0D2K2 578 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 GPNMBQ14956 572 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 WDR72Q3MJ13 1102 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 E4F1Q66K89 784 aaPredicted RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 ARHGEF19Q8IW93 802 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 DDX27Q96GQ7 796 aaKnown RBP14.69□□□□□ -0.06
VAPB-202ENST00000395802 UROC1Q96N76 676 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 SIX4Q9UIU6 781 aa14.69□□□□□ -0.06
VAPB-202ENST00000395802 ABHD14A-ACY1A0A1B0GW23 586 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 PRKCIP41743 596 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 SV2CQ496J9 727 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 TDRD12Q587J7 1177 aaKnown RBP14.68□□□□□ -0.06
VAPB-202ENST00000395802 C9orf57Q5W0N0 161 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 GJB7Q6PEY0 223 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 DEFB128Q7Z7B8 93 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 RTN4RL1Q86UN2 441 aaPredicted RBP14.68□□□□□ -0.06
VAPB-202ENST00000395802 TXLNBQ8N3L3 684 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 SHC3Q92529 594 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 LPPQ93052 612 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 TATDN2Q93075 761 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 ZFP42Q96MM3 310 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 XYLT2Q9H1B5 865 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 CYP3A43Q9HB55 503 aa14.68□□□□□ -0.06
VAPB-202ENST00000395802 LUC7LQ9NQ29 371 aaKnown RBP14.68□□□□□ -0.06
VAPB-202ENST00000395802 USP27XA6NNY8 438 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 PIRO00625 290 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 PTGESO14684 152 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 USP8P40818 1118 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 TAF6P49848 677 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 WDR59Q6PJI9 974 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 FAM71AQ8IYT1 594 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 GSTCDQ8NEC7 633 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 CXorf38Q8TB03 319 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 NHEJ1Q9H9Q4 299 aaPredicted RBP14.67□□□□□ -0.06
VAPB-202ENST00000395802 TUBGCP4Q9UGJ1 667 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 NUB1Q9Y5A7 615 aa14.67□□□□□ -0.06
VAPB-202ENST00000395802 ANO9A1A5B4 782 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 ARHGEF37A1IGU5 675 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 FOXN3O00409 490 aaPredicted RBP14.66□□□□□ -0.06
VAPB-202ENST00000395802 ZSCAN12O43309 604 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 EVI5O60447 810 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 LRRN2O75325 713 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 GFPT2O94808 682 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 SCNN1GP51170 649 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 KRT83P78385 493 aa14.66□□□□□ -0.06
VAPB-202ENST00000395802 ARID5AQ03989 594 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms