RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 MAGEC1O60732 1142 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 ITGA2BP08514 1039 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 GZMAP12544 262 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 SERPINB3P29508 390 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 PIK3CAP42336 1068 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 BPIFB4P59827 614 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 CDC16Q13042 620 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 CFAP157Q5JU67 520 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 C1QTNF12Q5T7M4 302 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 ZCCHC9Q8N567 271 aaKnown RBP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 PRR11Q96HE9 360 aaPredicted RBP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 SUDS3Q9H7L9 328 aaPredicted RBP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 NDE1Q9NXR1 346 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 HSFX1Q9UBD0 423 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 DNAJB4Q9UDY4 337 aa17.13■□□□□ 0.33
CHD1L-203ENST00000369259 MTO1Q9Y2Z2 717 aaKnown RBP17.13■□□□□ 0.33
CHD1L-203ENST00000369259 WNK3Q9BYP7 1800 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 A0A1W2PPM1 405 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 TMCC1O94876 653 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 CDK16Q00536 496 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 DEUP1Q05D60 604 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 CCDC174Q6PII3 467 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 ACAD11Q709F0 780 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 ANKS1BQ7Z6G8 1248 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 ERMNQ8TAM6 284 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 FAM161BQ96MY7 647 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 SAYSD1Q9NPB0 183 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
CHD1L-203ENST00000369259 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
CHD1L-203ENST00000369259 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 OPHN1O60890 802 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 ATP6V1G1O75348 118 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 PLS3P13797 630 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 AP2B1P63010 937 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 MAP3K10Q02779 954 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 C16orf86Q6ZW13 317 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 NET1Q7Z628 596 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 VTI1AQ96AJ9 217 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 MAK16Q9BXY0 300 aaKnown RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 UVRAGQ9P2Y5 699 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 ATP9BO43861 1147 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 RPA1P27694 616 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 CENPCQ03188 943 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 PHLDB2Q86SQ0 1253 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 MYLK4Q86YV6 388 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 MAPKAPK5Q8IW41 473 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 CCDC110Q8TBZ0 833 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 ZNF653Q96CK0 615 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 HERPUD2Q9BSE4 406 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 GTF3C4Q9UKN8 822 aa17.11■□□□□ 0.33
CHD1L-203ENST00000369259 R3HDM2Q9Y2K5 976 aaKnown RBP17.11■□□□□ 0.33
CHD1L-203ENST00000369259 GAP43P17677 238 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 ADRA1DP25100 572 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 COG2Q14746 738 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 SEPT7Q16181 437 aaKnown RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 C6orf163Q5TEZ5 329 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 PHACTR1Q9C0D0 580 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 EBF3Q9H4W6 596 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 NDUFA13Q9P0J0 144 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 SFI1A8K8P3 1242 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 ZBED4O75132 1171 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 KRT4P19013 534 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 CYP2J2P51589 502 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHD1L-203ENST00000369259 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
CHD1L-203ENST00000369259 KCNK13Q9HB14 408 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms