RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SLC35B2Q8TB61 432 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 POF1BQ8WVV4 589 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 TNPO1Q92973 898 aaKnown RBP4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 TRIM43Q96BQ3 446 aaPredicted RBP4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 NEIL1Q96FI4 390 aaPredicted RBP4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 TCF25Q9BQ70 676 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 PACSIN1Q9BY11 444 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 NELFAQ9H3P2 528 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 BRD9Q9H8M2 597 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 SEC61A2Q9H9S3 476 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 CERS4Q9HA82 394 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 PPCSQ9HAB8 311 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 SMURF2Q9HAU4 748 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 COL20A1Q9P218 1284 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 CFAP97Q9P2B7 532 aa4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 RGS17Q9UGC6 210 aaPredicted RBP4.58□□□□□ -1.68
RNU6-28P-201ENST00000362378 A0A1W2PRX2 142 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 TCRBV7S2A1N4TA0A589 114 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 TBKBP1A7MCY6 615 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 NPIPB6E9PJ23 425 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ABHD16AO95870 558 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ANXA1P04083 346 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 GJB1P08034 283 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 GNAI3P08754 354 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 PARP1P09874 1014 aaKnown RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 RARBP10826 455 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 PPM1AP35813 382 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 IL6STP40189 918 aaPredicted RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 GNAI1P63096 354 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 HABP2Q14520 560 aaPredicted RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 VMACQ2NL98 169 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ANKS6Q68DC2 871 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 CIAPIN1Q6FI81 312 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 HIBCHQ6NVY1 386 aaPredicted RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZNF529Q6P280 563 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 BORAQ6PGQ7 559 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 FAM111BQ6SJ93 734 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZNF783Q6ZMS7 281 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 GPRIN1Q7Z2K8 1008 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 PLEKHH3Q7Z736 793 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 MYLK4Q86YV6 388 aaPredicted RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 GPR135Q8IZ08 494 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 POU5F2Q8N7G0 328 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 MAML1Q92585 1016 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 KIAA1191Q96A73 305 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 HERPUD2Q9BSE4 406 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 BRIP1Q9BX63 1249 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 VPS11Q9H270 941 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 OAZ3Q9UMX2 235 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 LRCH1Q9Y2L9 728 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 PAXBP1Q9Y5B6 917 aa4.57□□□□□ -1.68
RNU6-28P-201ENST00000362378 A0A1W2PPC4 97 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 BTN3A1O00481 513 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 KIAA0391O15091 583 aaKnown RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 TBC1D4O60343 1298 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 STC2O76061 302 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 HAUS5O94927 633 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 POMCP01189 267 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ALAS1P13196 640 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 CR2P20023 1033 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ABCB4P21439 1286 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 RAP1GAPP47736 663 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 KCNJ5P48544 419 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 KCNC1P48547 511 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 EPHB4P54760 987 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 NOMO3P69849 1222 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 DUSP8Q13202 625 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 UBXN2BQ14CS0 331 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 TMEM95Q3KNT9 176 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 C3orf38Q5JPI3 329 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 TCERG1LQ5VWI1 586 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZNF365Q70YC5 407 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 MICU3Q86XE3 530 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 LGI4Q8N135 537 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ATP11CQ8NB49 1132 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 GIMAP8Q8ND71 665 aaPredicted RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZSCAN18Q8TBC5 510 aaPredicted RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 DDX17Q92841 729 aaKnown RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ARL8AQ96BM9 186 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZNF512Q96ME7 567 aaPredicted RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 CRB3Q9BUF7 120 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 ZNF518BQ9C0D4 1074 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 GPR35Q9HC97 309 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 SACM1LQ9NTJ5 587 aa4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-28P-201ENST00000362378 APOL1O14791 398 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 ADAMTS3O15072 1205 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 HALP42357 657 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 RPS16P62249 146 aaKnown RBP4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 PPP2CBP62714 309 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 PPP2CAP67775 309 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SLC13A2Q13183 592 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 SURF1Q15526 300 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 CSRP2Q16527 193 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 FAM214AQ32MH5 1076 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 METTL24Q5JXM2 366 aa4.55□□□□□ -1.68
RNU6-28P-201ENST00000362378 FKBP15Q5T1M5 1219 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms