RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 DR1Q01658 176 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 DCAF12L1Q5VU92 463 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 CENPFP49454 3210 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 IQCA1LA6NCM1 817 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 ADCY3O60266 1144 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 LGR5O75473 907 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 MMEP08473 750 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 TMEM253P0C7T8 217 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 ZNF211Q13398 564 aaPredicted RBP22.73■■□□□ 1.23
PTPN18-202ENST00000347849 SPOPLQ6IQ16 392 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 ARMCX2Q7L311 632 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 TXLNGYQ9BZA5 131 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 SMIM23A6NLE4 172 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 DDX3YO15523 660 aaKnown RBP22.73■■□□□ 1.23
PTPN18-202ENST00000347849 PIGRP01833 764 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 CHN1P15882 459 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 PLTPP55058 493 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 TDRD10Q5VZ19 366 aaKnown RBP22.73■■□□□ 1.23
PTPN18-202ENST00000347849 RPAINQ86UA6 219 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 MORC4Q8TE76 937 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 BRI3BPQ8WY22 251 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 NT5C1BQ96P26 610 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 SELENOSQ9BQE4 189 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 ERP44Q9BS26 406 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 MSTO1Q9BUK6 570 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 ERVK-5Q9HDB9 667 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 MCM8Q9UJA3 840 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 DAAM1Q9Y4D1 1078 aa22.73■■□□□ 1.23
PTPN18-202ENST00000347849 A0A0B4J269 797 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 FTLP02792 175 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 TNNI1P19237 187 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 MFAP3P55082 362 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 PTENP60484 403 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 PSMD6Q15008 389 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 WLSQ5T9L3 541 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 KDM4CQ9H3R0 1056 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 TTC7AQ9ULT0 858 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 SNX24Q9Y343 169 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 ZNFX1Q9P2E3 1918 aaKnown RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 ADGRA2Q96PE1 1338 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 TNFSF9P41273 254 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 LAMTOR4Q0VGL1 99 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 DUPD1Q68J44 220 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 PNMA8AQ86V59 439 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 GPRC5AQ8NFJ5 357 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 CTNNBL1Q8WYA6 563 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 RFFLQ8WZ73 363 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 FAM129AQ9BZQ8 928 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 RNPEPQ9H4A4 650 aa22.72■■□□□ 1.23
PTPN18-202ENST00000347849 RBAKQ9NYW8 714 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-202ENST00000347849 NCANO14594 1321 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ECM2O94769 699 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-202ENST00000347849 VNN1O95497 513 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 C4BPAP04003 597 aaKnown RBP22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ADORA2AP29274 412 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 GTF2H1P32780 548 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 PMS2P54278 862 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CLDN10P78369 228 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 FMO1Q01740 532 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 XRCC4Q13426 336 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 E2F5Q15329 346 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CCL15Q16663 113 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ZBTB33Q86T24 672 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 HOOK3Q86VS8 718 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 MPHOSPH6Q99547 160 aaKnown RBP22.71■■□□□ 1.23
PTPN18-202ENST00000347849 EPB41L4BQ9H329 900 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ZDHHC18Q9NUE0 388 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ATP8B3O60423 1300 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ATMINO43313 823 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-202ENST00000347849 MSCO60682 206 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CYP11B1P15538 503 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 ZACNQ401N2 412 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CCDC50Q8IVM0 306 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 RNF149Q8NC42 400 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CCDC197Q8NCU1 140 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 OR5B17Q8NGF7 314 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 KCNN1Q92952 543 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CENPTQ96BT3 561 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 FNBP1Q96RU3 617 aa22.71■■□□□ 1.23
PTPN18-202ENST00000347849 CCT8L1PA6NM43 557 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 PABPC3Q9H361 631 aaKnown RBP22.7■■□□□ 1.22
PTPN18-202ENST00000347849 TMEM134Q9H6X4 195 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 ANKRD62A6NC57 917 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 ZNF792Q3KQV3 632 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 TAPT1Q6NXT6 567 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 PLPPR4Q7Z2D5 763 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 SHCBP1Q8NEM2 672 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 RNF25Q96BH1 459 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-202ENST00000347849 ZNF317Q96PQ6 595 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-202ENST00000347849 CCDC113Q9H0I3 377 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 TRPC6Q9Y210 931 aa22.7■■□□□ 1.22
PTPN18-202ENST00000347849 CNTNAP2Q9UHC6 1331 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 IGKV6-21A0A0C4DH24 114 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 GOLGA6L10A0A0M3HER8 536 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 HLA-DRAP01903 254 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 IFI35P80217 286 aaPredicted RBP22.69■■□□□ 1.22
PTPN18-202ENST00000347849 SLC29A2Q14542 456 aa22.69■■□□□ 1.22
PTPN18-202ENST00000347849 DENND2CQ68D51 928 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms