RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FAM114A1Q8IWE2 563 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 GSTCDQ8NEC7 633 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 TMC2Q8TDI7 906 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 DDX27Q96GQ7 796 aaKnown RBP20.26■□□□□ 0.83
CDHR4-201ENST00000343366 ZFP42Q96MM3 310 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 PPP1R10Q96QC0 940 aaKnown RBP20.26■□□□□ 0.83
CDHR4-201ENST00000343366 PRRX2Q99811 253 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 KLK14Q9P0G3 267 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 PCDHB12Q9Y5F1 795 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 ANK1P16157 1881 aa20.26■□□□□ 0.83
CDHR4-201ENST00000343366 SYCE3A1L190 88 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 GOLGA8IPA6NC78 632 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 GOLGA8JA6NMD2 632 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 STX10O60499 249 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 GLP2RO95838 553 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 ALDH2P05091 517 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 PPM1AP35813 382 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 ALDH7A1P49419 539 aaKnown RBP20.25■□□□□ 0.83
CDHR4-201ENST00000343366 MCCD1P59942 119 aaPredicted RBP20.25■□□□□ 0.83
CDHR4-201ENST00000343366 CYP24A1Q07973 514 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 TMEM132DQ14C87 1099 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 PAN2Q504Q3 1202 aaKnown RBP20.25■□□□□ 0.83
CDHR4-201ENST00000343366 SEZ6Q53EL9 994 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 SPOUT1Q5T280 376 aaKnown RBP20.25■□□□□ 0.83
CDHR4-201ENST00000343366 ADGRD2Q7Z7M1 963 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 WDR49Q8IV35 697 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 FAM186BQ8IYM0 893 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 BEST2Q8NFU1 509 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 ENOX1Q8TC92 643 aaKnown RBP20.25■□□□□ 0.83
CDHR4-201ENST00000343366 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 KIF12Q96FN5 646 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 ASIC4Q96FT7 647 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 BPIFA3Q9BQP9 254 aa20.25■□□□□ 0.83
CDHR4-201ENST00000343366 WDR87Q6ZQQ6 2873 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 TRIM49BA6NDI0 452 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 PTGESO14684 152 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 IKBKBO14920 756 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 POMCP01189 267 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
CDHR4-201ENST00000343366 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
CDHR4-201ENST00000343366 DSC1Q08554 894 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 ZBTB41Q5SVQ8 909 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 FRMD5Q7Z6J6 570 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 CBWD2Q8IUF1 395 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 EFHBQ8N7U6 833 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 RDH13Q8NBN7 331 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 PBXIP1Q96AQ6 731 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 ANKRD36BP1Q96IX9 119 aa20.24■□□□□ 0.83
CDHR4-201ENST00000343366 RIF1Q5UIP0 2472 aaKnown RBP20.24■□□□□ 0.83
CDHR4-201ENST00000343366 AKAP3O75969 853 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 STX17P56962 302 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 ZBTB6Q15916 424 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 DUOXA2Q1HG44 320 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 SPATA1Q5VX52 437 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 LRRC55Q6ZSA7 311 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 FBXL6Q8N531 539 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 SPPL3Q8TCT6 385 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 PARD3BQ8TEW8 1205 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 ZNF558Q96NG5 402 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 DUSP9Q99956 384 aaKnown RBP20.23■□□□□ 0.83
CDHR4-201ENST00000343366 THAP9Q9H5L6 903 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 CWH43Q9H720 699 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 NRDE2Q9H7Z3 1164 aa20.23■□□□□ 0.83
CDHR4-201ENST00000343366 ARMCX3Q9UH62 379 aaPredicted RBP20.23■□□□□ 0.83
CDHR4-201ENST00000343366 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
CDHR4-201ENST00000343366 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 ITGB1P05556 798 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 TNNI1P19237 187 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 GATMP50440 423 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 VAMP7P51809 220 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 MARSP56192 900 aaKnown RBP20.22■□□□□ 0.83
CDHR4-201ENST00000343366 CLDN10P78369 228 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 BFSP1Q12934 665 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 JADE1Q6IE81 842 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 COLGALT2Q8IYK4 626 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 CGRRF1Q99675 332 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 FUCA2Q9BTY2 467 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 COLEC11Q9BWP8 271 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 SRRTQ9BXP5 876 aaKnown RBP20.22■□□□□ 0.83
CDHR4-201ENST00000343366 IGFLR1Q9H665 355 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
CDHR4-201ENST00000343366 MRPL42Q9Y6G3 142 aaKnown RBP20.22■□□□□ 0.83
CDHR4-201ENST00000343366 PTPRZ1P23471 2315 aaPredicted RBP20.21■□□□□ 0.83
CDHR4-201ENST00000343366 ZC3H11AO75152 810 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDHR4-201ENST00000343366 TNNC2P02585 160 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 LRPAP1P30533 357 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 GTF2H1P32780 548 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 CASP4P49662 377 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 MYL5Q02045 173 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 NAB2Q15742 525 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 CCDC40Q4G0X9 1142 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 KCNT2Q6UVM3 1135 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 ZMAT2Q96NC0 199 aaKnown RBP20.21■□□□□ 0.83
CDHR4-201ENST00000343366 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 INTS13Q9NVM9 706 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 MAGEC2Q9UBF1 373 aaPredicted RBP20.21■□□□□ 0.83
CDHR4-201ENST00000343366 ITGA11Q9UKX5 1188 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms