RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 WNK4Q96J92 1243 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SAMD11Q96NU1 681 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KCNK16Q96T55 309 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 TSC22D3Q99576 134 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 DSCC1Q9BVC3 393 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 BCO2Q9BYV7 579 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 WDR11Q9BZH6 1224 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 MAN1C1Q9NR34 630 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SLC25A13Q9UJS0 675 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ASAP1Q9ULH1 1129 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 RIPOR2Q9Y4F9 1068 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 COL5A3P25940 1745 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 INO80B-WBP1J3KQ70 363 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 PGRMC1O00264 195 aaKnown RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 NKRFO15226 690 aaKnown RBP eCLIP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 TM9SF1O15321 606 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KRT6AP02538 564 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KRT6BP04259 564 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KRT6CP48668 564 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SKOR1P84550 965 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 GIT2Q14161 759 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ANO1Q5XXA6 986 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 NCAPH2Q6IBW4 605 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 FBXO46Q6PJ61 603 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 DEFB128Q7Z7B8 93 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 FIBCD1Q8N539 461 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SLC44A5Q8NCS7 719 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SUN3Q8TAQ9 357 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 JADE3Q92613 823 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF653Q96CK0 615 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ACAP3Q96P50 834 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SELENOSQ9BQE4 189 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 FEM1BQ9UK73 627 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 EXOC6BQ9Y2D4 811 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KNTC1P50748 2209 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 APC2O95996 2303 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 DDX39AO00148 427 aaKnown RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 CYP27B1O15528 508 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 SGSM2O43147 1006 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 HSPD1P10809 573 aaKnown RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ACCSLQ4AC99 568 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 KIAA1755Q5JYT7 1200 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 RABGAP1LQ5R372 815 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 GPIHBP1Q8IV16 184 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 CCDC105Q8IYK2 499 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 LPAR1Q92633 364 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 CDCA5Q96FF9 252 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 DYDC2Q96IM9 177 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 ZNF512Q96ME7 567 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-202ENST00000339701 BPIFA3Q9BQP9 254 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 CD209Q9NNX6 404 aa3.46□□□□□ -1.86
CSMD3-202ENST00000339701 M0QYT0 321 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PCNX4Q63HM2 1172 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RHPN1Q8TCX5 695 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CHAC2Q8WUX2 184 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 TRIM56Q9BRZ2 755 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PLEKHA5Q9HAU0 1116 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 XPNPEP3Q9NQH7 507 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 IFNKQ9P0W0 207 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 USP20Q9Y2K6 914 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 SYCE1LA8MT33 242 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 LSM1O15116 133 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 SPAG7O75391 227 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 MUTP22033 750 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 LIG4P49917 911 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 DHX34Q14147 1143 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 GCKRQ14397 625 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 SF3B3Q15393 1217 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 KRT73Q86Y46 540 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 FBXL13Q8NEE6 735 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RFT1Q96AA3 541 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 OTULINQ96BN8 352 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 HAVCR1Q96D42 359 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 DGCR14Q96DF8 476 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PAGE5Q96GU1 130 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 KRT12Q99456 494 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 SLF1Q9BQI6 1058 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CHCHD6Q9BRQ6 235 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 YIPF2Q9BWQ6 316 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CCDC8Q9H0W5 538 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ARMCX3Q9UH62 379 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ASIC3Q9UHC3 531 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PITPNM2Q9BZ72 1349 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ADCY9O60503 1353 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 HEG1Q9ULI3 1381 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RRN3P2A6NIE6 340 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 TTC36A6NLP5 189 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CENPXA8MT69 81 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 H3BUI4 141 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 MYO1FO00160 1098 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ZBTB7BO15156 539 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 DYRK3O43781 588 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 CDH16O75309 829 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 PDE9AO76083 593 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 DDHD2O94830 711 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 ZCCHC18P0CG32 403 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RNASE9P60153 205 aaKnown RBP3.45□□□□□ -1.86
CSMD3-202ENST00000339701 UBXN1Q04323 297 aa3.45□□□□□ -1.86
CSMD3-202ENST00000339701 RCN2Q14257 317 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms